Clostridioides difficile R20291 |
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Putative Clostridioides difficile R20291 RM systems
Ref: Riedel,T. et al. unpublished
REBASE ref # 19234
Complete sequence: 4,204,902 bp
GenBank #: CP029423
REBASE acronym: Cdi20291
Org_num: 27480
All begin CDIF27147_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3206 | 687 aa hypothetical protein | |||
| 3207 | R | Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | Cdi20291ORF16210P |
| 3208 | 142 aa hypothetical protein | |||
| 3209 | DNA polymerase subunit beta | |||
| 3210 | 102 aa hypothetical protein | |||
| 3211 | S | S.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | S.Cdi20291ORF16210P |
| 3212 | M | M.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | M.Cdi20291ORF16210P |
| 3213 | tagatose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2931 | phospholipase | |||
| 2932 | M | M.Cdo072ORF14340P (100% identity) | CAAAAA | M.Cdi20291ORF14825P |
| 2933 | badm/rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2247 | sigma-54-dependent transcriptional regulator | |||
| 2248 | R | Cdo072McrCP (100% identity) | Cdi20291McrCP | |
| 2249 | R | Cdo072McrBP (100% identity) | Cdi20291McrBP | |
| 2250 | cell division protein FtsZ | |||