Methylomonas species LL1 |
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Putative Methylomonas species LL1 RM systems
Ref: Bodelier,P.L.E. et al. unpublished
REBASE ref # 32148
| Sequence length: | GenBank #: | |
| Chromosome: | 4,798,577 bp | CP064653 |
| plasmid unnamed1: | 125,316 bp | CP064652 |
REBASE acronym: MspLL1
Org_num: 48279
All begin IVG45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12350 | restriction endonuclease subunit S | |||
| 12355 | S | S.BceJBK9ORF820P (47% identity) | S1.MspLL1ORF12360P | |
| 12360 | M | M.TlaWSORF9170P (67% identity) | M.MspLL1ORF12360P | |
| 12365 | R | Msp14BORFAP (84% identity) | MspLL1ORF12360P | |
| 12370 | 483 aa hypothetical protein | |||
| 16345 | DUF86 domain-containing protein | |||
| 16350 | R | MlaLW14ORFGP (82% identity) | MspLL1ORF16355P | |
| 16355 | M | M.MlaLW14ORFGP (93% identity) | M.MspLL1ORF16355P | |
| 16360 | S | S.Mme26612ORF23790P (58% identity) | S.MspLL1ORF16355P | |
| 16365 | glutamate-5-semialdehyde dehydrogenase | |||
| 17075 | S1 RNA-binding domain-containing protein | |||
| 17080 | R | AspI13ORF9120P (86% identity) | MspLL1ORF17090P | |
| 17085 | S | S.OspSW4ORF4285P (37% identity) | S.MspLL1ORF17090P | |
| 17090 | M | M.MspS3LSCORF13950P (81% identity) | M.MspLL1ORF17090P | |
| 17095 | 482 aa hypothetical protein | |||
| 18940 | 242 aa hypothetical protein | |||
| 18945 | M | M.Mme26612ORF1195P (97% identity) | M.MspLL1ORF18945P | |
| 18950 | DUF262 domain-containing protein | |||
| 18955 | type II toxin-antitoxin system RelE/ParE family | |||
| 18960 | 70 aa hypothetical protein | |||
| 18965 | S | S.AspDN11ORF9560P (52% identity) | S.MspLL1ORF18945P | |
| 18970 | R | MspMK1ORFJP (94% identity) | MspLL1ORF18945P | |
| 18975 | 119 aa hypothetical protein | |||
| 19225 | amino acid adenylation domain-containing | |||
| 19230 | M | M.Tni5205ORFNP (83% identity) | M.MspLL1ORF19230P | |
| 19235 | 109 aa hypothetical protein | |||
| ??? | S | S.UbaMDORFO11P (27% identity) | S.MspLL1ORF19230P | |
| 19245 | transposase | |||
| 19250 | virulence RhuM family protein | |||
| 19255 | R | Tni5205ORFNP (82% identity) | MspLL1ORF19230P | |
| 19260 | acyl-CoA dehydrogenase family protein | |||
| 20935 | ABC transporter ATP-binding protein | |||
| 20940 | R | MorE10ORF10480P (75% identity) | MspLL1ORF20960P | |
| 20945 | DUF86 domain-containing protein | |||
| 20950 | nucleotidyltransferase domain-containing | |||
| 20955 | S | S.TspT1II (35% identity) | S.MspLL1ORF20960P | |
| 20960 | M | M.MlaLW14ORFIP (89% identity) | M.MspLL1ORF20960P | |
| 20965 | IS110 family transposase | |||
| plasmid unnamed1 | ||||
| 410 | restriction endonuclease | |||
| 415 | R | MmaMR1ORF62P (97% identity) | MspLL1ORF445P | |
| 420 | DUF1016 family protein | |||
| 425 | S | S2.XneSORF16970P (44% identity) | S1.MspLL1ORF445P | |
| 430 | AAA family ATPase | |||
| 435 | transposase | |||
| 440 | IS3 family transposase | |||
| 445 | M | M.MmaMR1ORF62P (97% identity) | M.MspLL1ORF445P | |
| 450 | SMEK domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16160 | DNA translocase FtsK | |||
| 16165 | M | M.Dli5ac10DndDP (23% identity) | M.MspLL1DndDP | |
| 16170 | 72 aa hypothetical protein | |||
| 16170 | 72 aa hypothetical protein | |||
| 16175 | M | M.TboBBSDndCP (50% identity) | M.MspLL1DndCP | |
| 16180 | bifunctional | |||
| 16425 | dicarboxylate/amino acid:cation symporter | |||
| 16430 | R | Tsp970ORF4585P (78% identity) | MspLL1ORF16435P | |
| 16435 | M | M.Par2038ORFCP (69% identity) | M.MspLL1ORF16435P | |
| 16440 | V | V.TthARhD1ORFAP (64% identity) | V.MspLL1ORF16435P | |
| 16445 | aminodeoxychorismate/anthranilate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19080 | deoxycytidylate deaminase | |||
| 19085 | R | Hsp7TORF6300P (65% identity) | MspLL1ORF19090P | |
| 19090 | M | M.MpaS2AMORF6515P (82% identity) | M.MspLL1ORF19090P | |
| 19095 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 405 | WGR domain-containing protein | |||
| 410 | R | Mle45370MrrP (97% identity) | MspLL1MrrP | |
| 415 | type I restriction endonuclease subunit R | |||