Pectobacterium parmentieri PB20 |
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Putative Pectobacterium parmentieri PB20 RM systems
Ref: Miroshnikov,K. et al. unpublished
REBASE ref # 32210
Complete sequence: 4,847,736 bp
GenBank #: CP065036
REBASE acronym: PpaPB20
Org_num: 48601
All begin PB20LOC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5790 | 428 aa hypothetical protein | |||
| 5795 | S | S.PpaQK5ORF8225P (100% identity) | S.PpaPB20ORF5800P | |
| 5800 | M | M.PpaQK5ORF8225P (100% identity) | M.PpaPB20ORF5800P | |
| 5805 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 575 | integrase arm-type DNA-binding domain-containing | |||
| 580 | R | PpaQK5DptFP (100% identity) | PpaPB20DptFP | |
| 585 | DNA phosphorothioation-dependent restriction | |||
| 580 | DNA phosphorothioation-dependent restriction | |||
| 585 | R | PpaQK5DptGP (100% identity) | PpaPB20DptGP | |
| 590 | DNA phosphorothioation-dependent restriction | |||
| 585 | DNA phosphorothioation-dependent restriction | |||
| 590 | R | PpaQK5DptHP (100% identity) | PpaPB20DptHP | |
| 595 | 174 aa hypothetical protein | |||
| 600 | DGQHR domain-containing protein | |||
| 605 | M | M.PpaQK5DndEP (100% identity) | M.PpaPB20DndEP | |
| 610 | DNA sulfur modification protein DndD | |||
| 605 | DNA sulfur modification protein DndE | |||
| 610 | M | M.PpaQK5DndDP (100% identity) | M.PpaPB20DndDP | |
| 615 | DNA phosphorothioation system sulfurtransferase | |||
| 610 | DNA sulfur modification protein DndD | |||
| 615 | M | M.PpaQK5DndCP (100% identity) | M.PpaPB20DndCP | |
| 620 | DNA sulfur modification protein DndB | |||
| 615 | DNA phosphorothioation system sulfurtransferase | |||
| 620 | M | M.PpaQK5DndBP (100% identity) | M.PpaPB20DndBP | |
| 625 | transcriptional regulator | |||
| 14035 | 576 aa hypothetical protein | |||
| 14040 | M | M.PpaQK5ORF16970P (100% identity) | RCCGGY | M.PpaPB20ORF14040P |
| 14045 | ATP-binding protein | |||
| 17310 | ribulose-phosphate 3-epimerase | |||
| 17315 | M | M.PwaDamP (100% identity) | GATC | M.PpaPB20DamP |
| 17320 | SPOR domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4840 | inovirus Gp2 family protein | |||
| 4845 | R | PpaQK5GmrSDP (100% identity) | PpaPB20GmrSDP | |
| 4850 | 178 aa hypothetical protein | |||