Campylobacter concisus P13UCO-S1 |
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Putative Campylobacter concisus P13UCO-S1 RM systems
Ref: Liu,F. et al. Emerg Microbes Infect 7 (1), 64 (2018)
REBASE ref # 26327
Complete sequence: 1,998,513 bp
GenBank #: CP060705
REBASE acronym: CcoP13S1
Org_num: 46166
All begin CVT08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4145 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 4150 | M | M.CcoP11S1ORF5310P (99% identity) | M.CcoP13S1ORF4150P | |
| 4155 | 56 aa hypothetical protein | |||
| 4160 | S | S.AplP1421ORF1490P (44% identity) | S.CcoP13S1ORF4150P | |
| 4165 | R | CcoP1O2ORF5655P (98% identity) | CcoP13S1ORF4150P | |
| 4170 | methylated-DNA--[protein]-cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4425 | XRE family transcriptional regulator | |||
| 4430 | M | M.CcoS1ORF9725P (79% identity) | M.CcoP13S1ORF4430P | |
| 4435 | R | CcoS1ORF9725P (76% identity) | CcoP13S1ORF4430P | |
| 4440 | 154 aa hypothetical protein | |||
| 5445 | 67 aa hypothetical protein | |||
| 5450 | M | M.CcoP3B1ORF565P (96% identity) | M.CcoP13S1ORF5450P | |
| 5455 | single-stranded DNA-binding protein | |||
| 7320 | relaxase/mobilization nuclease domain-containing | |||
| 7325 | M | M2.FnuSB14ORF4645P (95% identity) | M.CcoP13S1ORF7325P | |
| 7330 | R | Fsp8396ORF397P (70% identity) | CcoP13S1ORF7325P | |
| 7335 | 103 aa hypothetical protein | |||
| 7335 | 103 aa hypothetical protein | |||
| 7340 | M | M.Fsp8396ORF397P (94% identity) | M.CcoP13S1ORF7340P | |
| 7345 | helix-turn-helix transcriptional regulator | |||
| 8155 | DUF4368 domain-containing protein | |||
| 8160 | M | M.CcoP27S2ORF390P (100% identity) | M.CcoP13S1ORF8160P | |
| 8165 | R | Csh3277ORF2321P (100% identity) | CcoP13S1ORF8160P | |
| 8170 | cupin domain-containing protein | |||
| 10035 | FAD-dependent thymidylate synthase | |||
| 10040 | M | M.Cco12799ORF3250P (97% identity) | M.CcoP13S1ORF10040P | |
| 10045 | S-ribosylhomocysteine lyase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5620 | 150 aa hypothetical protein | |||
| 5625 | R | CcoDO4McrBP (72% identity) | CcoP13S1McrBP | |
| ??? | R | CcoS1McrCP (87% identity) | CcoP13S1McrCP | |
| 5640 | glycoside hydrolase family 3 protein | |||