Clostridioides difficile CD9501 |
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Putative Clostridioides difficile CD9501 RM systems
Ref: te Vrugt,M. and Minton,N.P. unpublished
REBASE ref # 31600
Complete sequence: 4,077,288 bp
GenBank #: CP068558
REBASE acronym: Cdi9501
Org_num: 46002
All begin JMW52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3625 | DNA-binding protein | |||
| 3630 | C | C.SanVSI16ORF6495P (98% identity) | C.Cdi9501ORF3635P | |
| 3635 | M | M.CdiTTIII (99% identity) | ATCNNNNNNCTC | M.Cdi9501ORF3635P |
| 3640 | S | S.CdiTTIII (98% identity) | ATCNNNNNNCTC | S.Cdi9501ORF3635P |
| 3645 | R | CdiTTIIIP (99% identity) | ATCNNNNNNCTC | Cdi9501ORF3635P |
| 3650 | 431 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4760 | 1076 aa hypothetical protein | |||
| 4765 | M | M.Pdi9689DndEP (100% identity) | M.Cdi9501DndEP | |
| 4770 | AAA family ATPase | |||
| 4765 | DndE family protein | |||
| 4770 | M | M.Pdi9689DndDP (95% identity) | M.Cdi9501DndDP | |
| 4775 | DNA phosphorothioation system sulfurtransferase | |||
| 4770 | AAA family ATPase | |||
| 4775 | M | M.Pdi9689DndCP (97% identity) | M.Cdi9501DndCP | |
| 4780 | LytTR family transcriptional regulator | |||
| 6385 | Rrf2 family transcriptional regulator | |||
| 6390 | M | M.Pdi120I (100% identity) | CAAAAA | M.Cdi9501ORF6390P |
| 6395 | patatin-like phospholipase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9805 | cell division protein | |||
| 9810 | R | Pdi120McrBP (100% identity) | Cdi9501McrBP | |
| 9815 | R | Pdi120McrCP (100% identity) | Cdi9501McrCP | |
| 9820 | sigma 54-interacting transcriptional regulator | |||