Escherichia coli Res13-Lact-EB12-05 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Res13-Lact-EB12-05 RM systems
Ref: Poulin-Laprade,D. et al. unpublished
REBASE ref # 31570
| Sequence length: | GenBank #: | |
| Chromosome: | 4,747,440 bp | CP062908 |
| plasmid unnamed1009: | 97,516 bp | CP062905 |
| plasmid unnamed476: | 112,076 bp | CP062907 |
| plasmid unnamednovel_1: | 49,398 bp | CP062909 |
REBASE acronym: Eco1205
Org_num: 45904
All begin IMP23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10280 | IS1 family transposase | |||
| 10285 | M | M.EcoLD931ORF12950P (48% identity) | M.Eco1205ORF10285P | |
| 10290 | S | S.EcoI110ORF13875P (100% identity) | S.Eco1205ORF10285P | |
| 10295 | YecA family protein | |||
| 10300 | R | EcoI110ORF13875P (100% identity) | Eco1205ORF10285P | |
| 10305 | M48 family metallopeptidase | |||
| 20545 | restriction endonuclease | |||
| ??? | M | M.Eco1436ORF20540P (100% identity) | AGCANNNNNNTGA | M.Eco1205ORF20550P |
| 20555 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.Eco1205ORF20550P |
| 20560 | R | SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | Eco1205ORF20550P |
| 20565 | endoribonuclease SymE | |||
| plasmid unnamed1009 | ||||
| 70 | type II toxin-antitoxin system Phd/YefM family | |||
| 75 | M | M.EcoEA13ORF24000P (100% identity) | M.Eco1205ORF75P | |
| 80 | S | S.EcoEA13ORF24000P (100% identity) | S.Eco1205ORF75P | |
| 85 | R | Eco1436ORF465P (100% identity) | Eco1205ORF75P | |
| 90 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2845 | cell division protein DamX | |||
| 2850 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1205DamP |
| 2855 | ribulose-phosphate 3-epimerase | |||
| 3480 | DUF2556 family protein | |||
| 3485 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco1205ORF3485P |
| 3490 | DNA-binding transcriptional regulator Fis | |||
| 9990 | HD domain-containing protein | |||
| 9995 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco1205DcmP |
| 10000 | V | V.SflSTLE3DcmP (100% identity) | V.Eco1205DcmP | |
| 10005 | drug/metabolite exporter YedA | |||
| 16215 | NinE family protein | |||
| 16220 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1205ORF16220P |
| 16225 | recombination protein NinB | |||
| 18605 | 379 aa hypothetical protein | |||
| 18610 | R | EcoSTEC413ORF7100P (100% identity) | Eco1205ORF18615P | |
| 18615 | M | M.EcoSTEC413ORF7100P (100% identity) | M.Eco1205ORF18615P | |
| 18620 | IS1 family transposase | |||
| plasmid unnamed1009 | ||||
| 185 | tellurite resistance TerB family protein | |||
| 200 | M | M.Eco1436ORF340P (100% identity) | M.Eco1205ORF200P | |
| 205 | recombination-associated protein RdgC | |||
| plasmid unnamed476 | ||||
| 795 | 103 aa hypothetical protein | |||
| 800 | M | M.StyR64ORFAP (100% identity) | M.Eco1205ORF800P | |
| 805 | 73 aa hypothetical protein | |||
| plasmid unnamednovel_1 | ||||
| 24020 | recombinase family protein | |||
| 24025 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco1205ORF24030P |
| 24030 | M | M.Sso12984ORF5284P (100% identity) | CCWGG | M.Eco1205ORF24030P |
| 24035 | IS1 family transposase | |||