Escherichia coli K-12 CETR1G40 |
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Putative Escherichia coli K-12 CETR1G40 RM systems
Ref: Green,K.A.C. et al. unpublished
REBASE ref # 31574
Complete sequence: 4,631,467 bp
GenBank #: CP064680
REBASE acronym: EcoTR1G40
Org_num: 45892
All begin IVL01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22015 | endoribonuclease SymE | |||
| 22020 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoTR1G40ORF22025P |
| 22025 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoTR1G40ORF22025P |
| 22030 | R | EcoW25113ORF11385P (100% identity) | AACNNNNNNGTGC | EcoTR1G40ORF22025P |
| 22035 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10025 | drug/metabolite exporter YedA | |||
| 10030 | V | V.SflFF64DcmP (100% identity) | V.EcoTR1G40DcmP | |
| 10035 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTR1G40DcmP |
| 10040 | phosphohydrolase | |||
| 16525 | DNA-binding transcriptional regulator Fis | |||
| 16530 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoTR1G40ORF16530P |
| 16535 | DUF2556 family protein | |||
| 17150 | ribulose-phosphate 3-epimerase | |||
| 17155 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTR1G40DamP |
| 17160 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5860 | site-specific DNA recombinase | |||
| 5865 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoTR1G40ORF5865P |
| 5870 | isocitrate dehydrogenase | |||
| 22000 | 906 aa hypothetical protein | |||
| 22005 | R | SenHNK130McrCP (100% identity) | EcoTR1G40McrCP | |
| 22010 | R | SenHNK130McrBP (100% identity) | EcoTR1G40McrBP | |
| 22015 | endoribonuclease SymE | |||
| 22030 | type I restriction-modification system | |||
| 22035 | R | SenHNK130MrrP (100% identity) | EcoTR1G40MrrP | |
| 22040 | GTPase | |||