Escherichia coli K-12 CETR3G40 |
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Putative Escherichia coli K-12 CETR3G40 RM systems
Ref: Green,K.A.C. et al. unpublished
REBASE ref # 31574
Complete sequence: 4,631,470 bp
GenBank #: CP064678
REBASE acronym: EcoTR3G40
Org_num: 45894
All begin IVL03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22005 | endoribonuclease SymE | |||
| 22010 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoTR3G40ORF22015P |
| 22015 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoTR3G40ORF22015P |
| 22020 | R | EcoW25113ORF11385P (100% identity) | AACNNNNNNGTGC | EcoTR3G40ORF22015P |
| 22025 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10020 | drug/metabolite exporter YedA | |||
| 10025 | V | V.SflFF64DcmP (100% identity) | V.EcoTR3G40DcmP | |
| 10030 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTR3G40DcmP |
| 10035 | phosphohydrolase | |||
| 16515 | DNA-binding transcriptional regulator Fis | |||
| 16520 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoTR3G40ORF16520P |
| 16525 | DUF2556 family protein | |||
| 17140 | ribulose-phosphate 3-epimerase | |||
| 17145 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTR3G40DamP |
| 17150 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5860 | site-specific DNA recombinase | |||
| 5865 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoTR3G40ORF5865P |
| 5870 | isocitrate dehydrogenase | |||
| 21990 | 906 aa hypothetical protein | |||
| 21995 | R | SenHNK130McrCP (100% identity) | EcoTR3G40McrCP | |
| 22000 | R | SenHNK130McrBP (100% identity) | EcoTR3G40McrBP | |
| 22005 | endoribonuclease SymE | |||
| 22020 | type I restriction-modification system | |||
| ??? | R | EcoZK126MrrP (100% identity) | EcoTR3G40MrrP | |
| 22030 | GTPase | |||