Escherichia coli isolate L4_E1441_ETEC |
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Putative Escherichia coli isolate L4_E1441_ETEC RM systems
Ref: Page,A. and Bastkowski,S. unpublished
REBASE ref # 31576
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,869,798 bp | LR883012 |
| plasmid 2: | 130,302 bp | LR883013 |
REBASE acronym: EcoE1441
Org_num: 45920
All begin ETECE1441_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1990 | Uncharacterised protein | |||
| 1991 | M | M.EcoF5505I (100% identity) | ACAGNNNNNNTGC | M.EcoE1441ORF1991P |
| 1992 | S | S.EcoF5505I (100% identity) | ACAGNNNNNNTGC | S.EcoE1441ORF1991P |
| 1993 | Uncharacterised protein | |||
| 1994 | Uncharacterised protein | |||
| 1995 | R | Eco34C18ORF9275P (100% identity) | ACAGNNNNNNTGC | EcoE1441ORF1991P |
| 1996 | Protein of uncharacterised function DUF45 | |||
| 4163 | Uncharacterised protein | |||
| 4164 | M | M.SflN110ORF19045P (100% identity) | M.EcoE1441ORF4164P | |
| 4165 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 360 | cell division protein DamX | |||
| 361 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE1441DamP |
| 362 | DNA adenine methylase | |||
| 488 | Protein of uncharacterised function (DUF2556) | |||
| 489 | M | M.EcoF5505ORFAP (100% identity) | ATGCAT | M.EcoE1441ORF489P |
| 490 | DNA-binding transcriptional regulator Fis | |||
| 1464 | NinB protein | |||
| 1465 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoE1441ORF1465P |
| 1466 | Uncharacterised protein | |||
| 1920 | phosphohydrolase | |||
| 1921 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoE1441DcmP |
| 1922 | V | V.SsoSE61DcmP (100% identity) | V.EcoE1441DcmP | |
| 1923 | drug/metabolite exporter YedA | |||
| 3747 | Uncharacterised protein | |||
| 3748 | M | M.EcoVL02ORF18020P (100% identity) | M.EcoE1441ORF3748P | |
| 3749 | Uncharacterised protein | |||
| 3802 | Lysis protein S | |||
| 3803 | M | M.EcoF5505ORFCP (100% identity) | M.EcoE1441ORF3803P | |
| 3804 | Uncharacterised protein | |||
| 3810 | 108 aa hypothetical protein BXT95_14770 | |||
| 3811 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.EcoE1441ORF3811P |
| 3812 | PerC transcriptional activator | |||
| 4159 | Domain of uncharacterised function (DUF303) | |||
| 4160 | R | SflSTLE4ORF19250P (100% identity) | EcoE1441ORF4160P | |
| 4161 | 5-methylcytosine-specific restriction enzyme | |||
| 4218 | sigma-54-dependent Fis family transcriptional regulator | |||
| 4219 | R | Eco9095ORF4401P (100% identity) | EcoE1441ORF4219P | |
| 4220 | Integrase core domain | |||
| plasmid 2 | ||||
| 4870 | Uncharacterised protein | |||
| 4871 | M | M.EcoF5505ORFFP (100% identity) | M.EcoE1441ORF4871P | |
| 4872 | TnpA, transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4160 | Uncharacterised protein | |||
| 4161 | R | SflSTLE4McrCP (100% identity) | EcoE1441McrCP | |
| 4162 | R | EcoF5505McrBP (100% identity) | EcoE1441McrBP | |
| 4163 | Uncharacterised protein | |||