Escherichia coli isolate L3_E36_ETEC |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli isolate L3_E36_ETEC RM systems
Ref: Page,A. and Bastkowski,S. unpublished
REBASE ref # 31576
| Sequence length: | GenBank #: | |
| chromosome 1: | 5,151,162 bp | LR882997 |
| plasmid 2: | 381,858 bp | LR882998 |
| plasmid 3: | 99,448 bp | LR882999 |
REBASE acronym: EcoE36
Org_num: 45919
All begin ETECE36_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 988 | cell division protein DamX | |||
| 989 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE36DamP |
| 990 | Ribulose-phosphate | |||
| 1105 | 59 aa hypothetical protein BvCmsA139A_01858 | |||
| 1106 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoE36ORF1106P |
| 1107 | DNA-binding transcriptional regulator Fis | |||
| 1838 | DUF3850 domain-containing protein | |||
| 1839 | M | M.Sen54117ORF1166P (100% identity) | M.EcoE36ORF1839P | |
| 1840 | replication endonuclease | |||
| 1948 | zinc-ribbon domain and TM2 domain-containing protein | |||
| 1949 | M | M.Eco3279ORF12675P (98% identity) | M.EcoE36ORF1949P | |
| 1950 | ribosomal subunit interface protein | |||
| 2641 | phosphohydrolase | |||
| 2642 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoE36DcmP |
| 2643 | V | V.Eco504838DcmP (74% identity) | V.EcoE36DcmP | |
| 2644 | drug/metabolite exporter YedA | |||
| 2763 | 65 aa hypothetical protein ECDEC11D_2366 | |||
| 2764 | M | M.Eco504838ORFAP (100% identity) | M.EcoE36ORF2764P | |
| 2769 | 79 aa hypothetical protein BW72_07150 | |||
| 3693 | 74 aa hypothetical protein AWP61_20605 | |||
| 3696 | M | M.EcoF736ORF22975P (100% identity) | M.EcoE36ORF3696P | |
| 3697 | 65 aa hypothetical protein ECDEC11D_2366 | |||
| 4209 | protein ninX | |||
| 4210 | M | M.EcoYSP81ORFGP (96% identity) | GATC | M.EcoE36ORF4210P |
| 4211 | recombination protein ninB from phage origin | |||
| 5057 | sialate O-acetylesterase | |||
| 5058 | R | EcoPK8566ORF2340P (100% identity) | EcoE36ORF5058P | |
| 5059 | 332 aa hypothetical protein | |||
| 5062 | 1213 aa conserved hypothetical protein | |||
| 5063 | RM | EcoFP2ORF70P (100% identity) | CRARCAG | EcoE36ORF5063P |
| 5064 | 865 aa hypothetical protein AZ037_000236 | |||
| 5224 | 374 aa hypothetical protein | |||
| 5225 | M | M.Kpn80191ORFAP (100% identity) | CTGAAG | M.EcoE36ORF5225P |
| 5226 | 60 aa hypothetical protein | |||
| plasmid 2 | ||||
| 46932 | Orf1, transposase | |||
| ??? | M | M.EcoR3001ORF25605P (100% identity) | M.EcoE36ORFAP | |
| 152159 | Uncharacterised protein | |||
| 46933 | Orf1, transposase | |||
| ??? | M | M.Sfl2142ORF380P (100% identity) | M.EcoE36ORFBP | |
| 276 | Uncharacterised protein | |||
| 46770 | plasmid SOS inhibition protein A,PsiA protein | |||
| 46848 | M | M.Eco03279ORFFP (100% identity) | M.EcoE36ORF46849P | |
| 46934 | Orf1, transposase | |||
| plasmid 3 | ||||
| 594 | Protein of uncharacterised function (DUF1281) | |||
| ??? | M | M.Sso866ORF27155P (100% identity) | M.EcoE36ORFCP | |
| 592 | Uncharacterised protein | |||