Hymenobacter species NBH84 |
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Putative Hymenobacter species NBH84 RM systems
Ref: Benaud,N. et al. Environ Microbiol (2020) In press
REBASE ref # 31577
| Sequence length: | GenBank #: | |
| Chromosome: | 4,779,090 bp | CP043644 |
| plasmid unnamed1: | 190,353 bp | CP043645 |
| plasmid unnamed2: | 137,232 bp | CP043646 |
REBASE acronym: HspH84
Org_num: 45927
All begin F1C16_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5820 | magnesium chelatase | |||
| 5825 | RM | HspS2202ORF10510P (63% identity) | HspH84ORF5825P | |
| 5830 | 82 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 20665 | sensor histidine kinase | |||
| 20670 | M | M.Bsp10303ORFBP (44% identity) | M.HspH84ORF20670P | |
| 20675 | V | V.Hsp0102ORFBP (65% identity) | V.HspH84ORF20670P | |
| 19950 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 20800 | DEAD/DEAH box helicase | |||
| 20805 | M | M.Hsp26554ORF11705P (57% identity) | M.HspH84ORF20805P | |
| 20810 | R | Hsp2118ORFDP (83% identity) | HspH84ORF20805P | |
| 20815 | 301 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18830 | TonB-dependent receptor | |||
| 18835 | R | Hsp5413J13McrCP (65% identity) | HspH84McrCP | |
| 18840 | R | Hsp5413J13McrBP (90% identity) | HspH84McrBP | |
| 18845 | L-fucose:H+ symporter permease | |||