Streptomyces finlayi NBSH44 |
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Putative Streptomyces finlayi NBSH44 RM systems
Ref: Benaud,N. et al. Environ Microbiol (2020) In press
REBASE ref # 31577
Complete sequence: 7,474,454 bp
GenBank #: CP045702
REBASE acronym: SfiNBSH44
Org_num: 45962
All begin F0344_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17380 | LLM class flavin-dependent oxidoreductase | |||
| 17385 | M | M.Ssp387ORF19380P (99% identity) | M.SfiNBSH44ORF17385P | |
| 17390 | S | S.Ssp387ORF19380P (98% identity) | S.SfiNBSH44ORF17385P | |
| 17395 | 71 aa hypothetical protein | |||
| 19195 | 108 aa hypothetical protein | |||
| 19200 | R | Ssp794ORF9575P (92% identity) | SfiNBSH44ORF19220P | |
| 19205 | S | S.Sni3406ORF15510P (31% identity) | S2.SfiNBSH44ORF19220P | |
| 19210 | IS110 family transposase | |||
| 19215 | S | S.MspRV43ORFEP (38% identity) | S1.SfiNBSH44ORF19220P | |
| 19220 | M | M.Sca33ORF23045P (91% identity) | M.SfiNBSH44ORF19220P | |
| 19225 | 103 aa hypothetical protein | |||
| 20605 | N-6 DNA methylase | |||
| 20610 | M | M.San22ORF22660P (96% identity) | M.SfiNBSH44ORF20610P | |
| 20615 | S | S.San01625ORF15575P (57% identity) | S.SfiNBSH44ORF20610P | |
| 20620 | R | San01625ORF15575P (94% identity) | SfiNBSH44ORF20610P | |
| 20625 | 116 aa hypothetical protein | |||
| 23505 | RloB domain-containing protein | |||
| 23510 | M | M.Sru4426ORF1818P (84% identity) | M.SfiNBSH44ORF23510P | |
| 23515 | DUF397 domain-containing protein | |||
| 24235 | GFA family protein | |||
| 24240 | M | M.SspBB111ORF9575P (92% identity) | M.SfiNBSH44ORF24240P | |
| 24245 | S | S.SspMG28ORF6070P (86% identity) | S.SfiNBSH44ORF24240P | |
| 24250 | R | SspBB111ORF9575P (98% identity) | SfiNBSH44ORF24240P | |
| 24255 | 78 aa hypothetical protein | |||
| 26265 | cupin domain-containing protein | |||
| 26270 | R | Ssp562ORF34310P (93% identity) | SfiNBSH44ORF26285P | |
| 26275 | 199 aa hypothetical protein | |||
| 26280 | nucleotidyl transferase AbiEii/AbiGii toxin | |||
| 26285 | M | M.SluMM109ORF12060P (91% identity) | M.SfiNBSH44ORF26285P | |
| 26290 | S | S.CcaTL65SspGP (67% identity) | S.SfiNBSH44ORF26285P | |
| 26295 | DNA repair protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3410 | 558 aa hypothetical protein | |||
| 3415 | M | M.Ssp0134ORF9670P (79% identity) | M.SfiNBSH44ORF3415P | |
| 3425 | helicase | |||
| 3430 | RM | Ssp85ORF2985P (86% identity) | SfiNBSH44ORF3430P | |
| 3435 | DUF397 domain-containing protein | |||
| 4835 | 810 aa hypothetical protein | |||
| ??? | M | M.Ssp4723ORF15960P (92% identity) | M.SfiNBSH44ORF4840P | |
| 4850 | DNA polymerase | |||
| 6665 | DUF397 domain-containing protein | |||
| 6670 | RM | Sma4137ORF1559P (66% identity) | SfiNBSH44ORF6670P | |
| 6675 | helicase | |||
| 7225 | helicase | |||
| 7230 | RM | San80ORF29760P (99% identity) | SfiNBSH44ORF7230P | |
| 7800 | DUF4913 domain-containing protein | |||
| 7805 | M | M.Ssp304ORF8500P (96% identity) | M.SfiNBSH44ORF7805P | |
| 7810 | IS4 family transposase | |||
| 8025 | 203 aa hypothetical protein | |||
| 8030 | M | M.Ssp607ORF30760P (91% identity) | M.SfiNBSH44ORF8030P | |
| 8035 | replicative DNA helicase | |||
| 19615 | IS4 family transposase | |||
| 19620 | RM | Ssp433ORF22620P (73% identity) | SfiNBSH44ORF19620P | |
| 19625 | 3-hydroxymethylcephem carbamoyltransferase | |||
| 19860 | DUF4913 domain-containing protein | |||
| 19865 | M | M.Ssp0023ORF32795P (82% identity) | M.SfiNBSH44ORF19865P | |
| 19870 | 193 aa hypothetical protein | |||
| 19975 | 379 aa hypothetical protein | |||
| 19980 | M | M.Ssp342ORF32195P (99% identity) | M.SfiNBSH44ORF19980P | |
| 19985 | 311 aa hypothetical protein | |||
| 23875 | replicative DNA helicase | |||
| 23880 | M | M.San7ORF28830P (96% identity) | M.SfiNBSH44ORF23880P | |
| 23885 | 209 aa hypothetical protein | |||
| 24115 | 374 aa hypothetical protein | |||
| 24120 | M | M.SspBB111ORF9700P (99% identity) | M.SfiNBSH44ORF24120P | |
| 24125 | DUF4913 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3470 | sigma-70 family RNA polymerase sigma factor | |||
| 3475 | R | Sun5McrBP (69% identity) | SfiNBSH44McrBP | |
| 3480 | R | Ssp0134McrCP (69% identity) | SfiNBSH44McrCP | |
| 3485 | AAA family ATPase | |||