Alphaproteobacteria bacterium R1DC25 |
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Putative Alphaproteobacteria bacterium R1DC25 RM systems
Ref: Sefrji,F. et al. unpublished
REBASE ref # 31571
Complete sequence: 4,630,536 bp
GenBank #: CP058214
REBASE acronym: AbaDC25
Org_num: 45879
All begin HW532_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8460 | M48 family metallopeptidase | |||
| 8465 | R | Smeml45ORF9525P (76% identity) | AbaDC25ORF8480P | |
| 8470 | DUF262 domain-containing protein | |||
| 8475 | S | S.Bja5038ORFBP (65% identity) | S.AbaDC25ORF8480P | |
| 8480 | M | M.Bsp9215ORF10713P (75% identity) | M.AbaDC25ORF8480P | |
| 8485 | 68 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8435 | integrase arm-type DNA-binding domain-containing | |||
| 8440 | M | M.MspARG1ORF23020P (42% identity) | M.AbaDC25ORF8440P | |
| 8445 | ATP-binding protein | |||
| 15820 | DEAD/DEAH box helicase | |||
| 15825 | M | M.CspAA79ORF4995P (70% identity) | M.AbaDC25ORF15825P | |
| 15830 | MarR family transcriptional regulator | |||
| 18625 | Com family DNA-binding transcriptional | |||
| 18630 | M | M.AbaDC25ORF19240P (97% identity) | M.AbaDC25ORF18630P | |
| 18635 | IMP dehydrogenase | |||
| 19235 | Com family DNA-binding transcriptional | |||
| 19240 | M | M.AbaDC25ORF18630P (97% identity) | M.AbaDC25ORF19240P | |
| 19245 | TRAP transporter substrate-binding protein | |||
| 21445 | tyrosine-type recombinase/integrase | |||
| 21450 | R | BspSL145ORF16960P (70% identity) | AbaDC25ORF21460P | |
| 21455 | V | V.BspSL145ORF16960P (63% identity) | V.AbaDC25ORF21460P | |
| 21460 | M | M.MpaNE2ORF1475P (60% identity) | M.AbaDC25ORF21460P | |
| 21465 | FRG domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4975 | ribonuclease HII | |||
| 4980 | M | M.Asp23150ORFAP (64% identity) | M.AbaDC25ORF4980P | |
| 4985 | A/G-specific adenine glycosylase | |||