Xylella fastidiosa subsp. fastidiosa Bakersfield-8 |
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Putative Xylella fastidiosa subsp. fastidiosa Bakersfield-8 RM systems
Ref: O'Leary,M.L. et al. unpublished
REBASE ref # 31568
Complete sequence: 2,553,893 bp
GenBank #: CP064334
REBASE acronym: Xfa8
Org_num: 45966
All begin IUD20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1200 | M48 family metallopeptidase | |||
| 1205 | R | Xfav13ORF1230P (100% identity) | Xfa8ORF1225P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa8ORF1225P | |
| 1225 | M | M.Xfav13ORF1230P (100% identity) | M.Xfa8ORF1225P | |
| 1230 | 68 aa hypothetical protein | |||
| 11065 | 70 aa hypothetical protein | |||
| 11070 | R | Xfav13ORF11050P (100% identity) | Xfa8ORF11080P | |
| 11075 | S | S.Xfav13ORF11050P (100% identity) | S.Xfa8ORF11080P | |
| 11080 | M | M.Xfav13ORF11050P (100% identity) | M.Xfa8ORF11080P | |
| 11085 | HNH endonuclease | |||
| 11085 | HNH endonuclease | |||
| 11090 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa8ORF11105P |
| 11095 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa8ORF11105P |
| 11100 | 88 aa hypothetical protein | |||
| 11105 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa8ORF11105P |
| 11110 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3050 | response regulator | |||
| 3055 | M | M.Xfav13ORF3100P (100% identity) | M.Xfa8ORF3055P | |
| 3060 | R | R1.Xfav13ORF3100P (100% identity) | R1.Xfa8ORF3055P | |
| 3065 | R | R2.Xfav13ORF3100P (100% identity) | R2.Xfa8ORF3055P | |
| 3070 | uroporphyrinogen decarboxylase | |||
| 5755 | 50 aa hypothetical protein | |||
| 5760 | M | M.Xfa92ORF1206P (51% identity) | M.Xfa8ORF5760P | |
| 5765 | Ax21 family protein | |||
| 7180 | lysozyme | |||
| 7185 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa8ORF7185P | |
| 7190 | 79 aa hypothetical protein | |||
| 7255 | low molecular weight phosphotyrosine protein | |||
| 7260 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa8ORF7260P | |
| 7265 | type II toxin-antitoxin system RelE/ParE family | |||
| 8655 | 206 aa hypothetical protein | |||
| 8660 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa8ORF8660P |
| 8665 | R | Xfav25ORF3130P (100% identity) | TTCGAA | Xfa8ORF8660P |
| 8670 | 69 aa hypothetical protein | |||
| 8865 | DNA primase | |||
| 8870 | R | Xfav13ORF8800P (99% identity) | Xfa8ORF8875P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa8ORF8875P | |
| 8885 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4390 | 3-oxoacyl-ACP synthase III | |||
| 4395 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa8ORF4395P | |
| 4400 | R | Xfav13ORF4440P (100% identity) | Xfa8ORF4395P | |
| 4405 | alpha/beta fold hydrolase | |||