Putative Xylella fastidiosa subsp. fastidiosa Bakersfield-11 RM systems
Ref: O'Leary,M.L. et al. unpublished
REBASE ref # 31568
Complete sequence: 2,554,506 bp
GenBank #: CP064332
REBASE acronym: Xfa11
Org_num: 45873
All begin IUD21_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1200 | M48 family metallopeptidase | |||
1205 | R | Xfav13ORF1230P (100% identity) | Xfa11ORF1225P | |
??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa11ORF1225P | |
1225 | M | M.Xfav13ORF1230P (100% identity) | M.Xfa11ORF1225P | |
1230 | 68 aa hypothetical protein | |||
11050 | 70 aa hypothetical protein | |||
11055 | R | Xfav13ORF11050P (100% identity) | Xfa11ORF11065P | |
11060 | S | S.Xfav13ORF11050P (100% identity) | S.Xfa11ORF11065P | |
11065 | M | M.Xfav13ORF11050P (100% identity) | M.Xfa11ORF11065P | |
11070 | HNH endonuclease | |||
11070 | HNH endonuclease | |||
11075 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa11ORF11090P |
11080 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa11ORF11090P |
11085 | 88 aa hypothetical protein | |||
11090 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa11ORF11090P |
11095 | LysE family translocator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3055 | response regulator | |||
3060 | M | M.Xfav13ORF3100P (100% identity) | M.Xfa11ORF3060P | |
3065 | R | R1.Xfav13ORF3100P (100% identity) | R1.Xfa11ORF3060P | |
3070 | R | R2.Xfav13ORF3100P (100% identity) | R2.Xfa11ORF3060P | |
3075 | uroporphyrinogen decarboxylase | |||
5750 | 50 aa hypothetical protein | |||
??? | M | M.Xfav13ORF5610P (100% identity) | M.Xfa11ORF5755P | |
5760 | Ax21 family protein | |||
7195 | lysozyme | |||
7200 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa11ORF7200P | |
7205 | 79 aa hypothetical protein | |||
7270 | low molecular weight phosphotyrosine protein | |||
7275 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa11ORF7275P | |
7280 | type II toxin-antitoxin system RelE/ParE family | |||
8645 | 135 aa hypothetical protein | |||
8650 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa11ORF8650P |
8655 | R | Xfav25ORF3130P (100% identity) | TTCGAA | Xfa11ORF8650P |
8660 | 69 aa hypothetical protein | |||
8855 | DNA primase | |||
8860 | R | Xfav13ORF8800P (100% identity) | Xfa11ORF8865P | |
??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa11ORF8865P | |
8875 | tryptophan--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4395 | 3-oxoacyl-ACP synthase III | |||
4400 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa11ORF4400P | |
4405 | R | Xfav13ORF4440P (100% identity) | Xfa11ORF4400P | |
4410 | alpha/beta fold hydrolase |