Xylella fastidiosa subsp. fastidiosa Bakersfield-14 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xylella fastidiosa subsp. fastidiosa Bakersfield-14 RM systems
Ref: O'Leary,M.L. et al. unpublished
REBASE ref # 31568
Complete sequence: 2,536,882 bp
GenBank #: CP064328
REBASE acronym: Xfa14
Org_num: 45875
All begin IUD25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1185 | M48 family metallopeptidase | |||
| 1190 | R | Xfav13ORF1230P (100% identity) | Xfa14ORF1210P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa14ORF1210P | |
| 1210 | M | M.Xfav13ORF1230P (100% identity) | M.Xfa14ORF1210P | |
| 1215 | 53 aa hypothetical protein | |||
| 10945 | 70 aa hypothetical protein | |||
| 10950 | R | Xfav13ORF11050P (100% identity) | Xfa14ORF10960P | |
| 10955 | S | S.Xfav13ORF11050P (100% identity) | S.Xfa14ORF10960P | |
| 10960 | M | M.Xfav13ORF11050P (100% identity) | M.Xfa14ORF10960P | |
| 10965 | HNH endonuclease | |||
| 10965 | HNH endonuclease | |||
| 10970 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa14ORF10985P |
| 10975 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa14ORF10985P |
| 10980 | 88 aa hypothetical protein | |||
| 10985 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa14ORF10985P |
| 10990 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3040 | response regulator | |||
| 3045 | M | M.Xfav13ORF3100P (100% identity) | M.Xfa14ORF3045P | |
| 3050 | R | R1.Xfav13ORF3100P (100% identity) | R1.Xfa14ORF3045P | |
| 3055 | R | R2.Xfav13ORF3100P (100% identity) | R2.Xfa14ORF3045P | |
| 3060 | uroporphyrinogen decarboxylase | |||
| 5600 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | M.Xfa14ORF5605P | |
| 5610 | Ax21 family protein | |||
| 7050 | lysozyme | |||
| 7055 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa14ORF7055P | |
| 7060 | 51 aa hypothetical protein | |||
| 7125 | low molecular weight phosphotyrosine protein | |||
| 7130 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa14ORF7130P | |
| 7135 | type II toxin-antitoxin system RelE/ParE family | |||
| 8510 | 135 aa hypothetical protein | |||
| 8515 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa14ORF8515P |
| 8520 | R | Xfav25ORF3130P (100% identity) | TTCGAA | Xfa14ORF8515P |
| 8525 | 69 aa hypothetical protein | |||
| 8725 | 56 aa hypothetical protein | |||
| 8730 | R | Xfav13ORF8800P (100% identity) | Xfa14ORF8735P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa14ORF8735P | |
| 8745 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4385 | 3-oxoacyl-ACP synthase III | |||
| 4390 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa14ORF4390P | |
| 4395 | R | Xfav13ORF4440P (100% identity) | Xfa14ORF4390P | |
| 4400 | alpha/beta fold hydrolase | |||