Xylella fastidiosa subsp. fastidiosa Bakersfield-13 |
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Putative Xylella fastidiosa subsp. fastidiosa Bakersfield-13 RM systems
Ref: O'Leary,M.L. et al. unpublished
REBASE ref # 31568
Complete sequence: 2,537,289 bp
GenBank #: CP064330
REBASE acronym: Xfa13
Org_num: 45874
All begin IUD22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1210 | M48 family metallopeptidase | |||
| 1215 | R | Xfav13ORF1230P (100% identity) | Xfa13ORF1235P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa13ORF1235P | |
| 1235 | M | M.Xfav13ORF1230P (100% identity) | M.Xfa13ORF1235P | |
| 1240 | 68 aa hypothetical protein | |||
| 10945 | 70 aa hypothetical protein | |||
| 10950 | R | Xfav13ORF11050P (100% identity) | Xfa13ORF10960P | |
| 10955 | S | S.Xfav13ORF11050P (100% identity) | S.Xfa13ORF10960P | |
| 10960 | M | M.Xfav13ORF11050P (100% identity) | M.Xfa13ORF10960P | |
| 10965 | HNH endonuclease | |||
| 10965 | HNH endonuclease | |||
| 10970 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa13ORF10985P |
| 10975 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa13ORF10985P |
| 10980 | 88 aa hypothetical protein | |||
| 10985 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa13ORF10985P |
| 10990 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3060 | response regulator | |||
| 3065 | M | M.Xfav13ORF3100P (100% identity) | M.Xfa13ORF3065P | |
| 3070 | R | R1.Xfav13ORF3100P (100% identity) | R1.Xfa13ORF3065P | |
| 3075 | R | R2.Xfav13ORF3100P (100% identity) | R2.Xfa13ORF3065P | |
| 3080 | uroporphyrinogen decarboxylase | |||
| 5615 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | M.Xfa13ORF5620P | |
| 5625 | Ax21 family protein | |||
| 7045 | lysozyme | |||
| 7050 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa13ORF7050P | |
| 7055 | 51 aa hypothetical protein | |||
| 7120 | low molecular weight phosphotyrosine protein | |||
| 7125 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa13ORF7125P | |
| 7130 | type II toxin-antitoxin system RelE/ParE family | |||
| 8505 | 135 aa hypothetical protein | |||
| 8510 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa13ORF8510P |
| 8515 | R | Xfav25ORF3130P (100% identity) | TTCGAA | Xfa13ORF8510P |
| 8520 | 69 aa hypothetical protein | |||
| 8720 | 56 aa hypothetical protein | |||
| 8725 | R | Xfav13ORF8800P (100% identity) | Xfa13ORF8730P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa13ORF8730P | |
| 8740 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4400 | 3-oxoacyl-ACP synthase III | |||
| 4405 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa13ORF4405P | |
| 4410 | R | Xfav13ORF4440P (100% identity) | Xfa13ORF4405P | |
| 4415 | alpha/beta fold hydrolase | |||