Rodentibacter species DSM 111151 |
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Putative Rodentibacter species DSM 111151 RM systems
Ref: Benga,L. and Lautwein,T. unpublished
REBASE ref # 31564
Complete sequence: 2,496,734 bp
GenBank #: CP063056
REBASE acronym: Rsp111151
Org_num: 45858
All begin IHV77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4670 | tyrosine-type recombinase/integrase | |||
| 4675 | S | S2.Aeq4038ORF10330P (69% identity) | S.Rsp111151ORF4685P | |
| ??? | M | M.Age22229ORF7560P (64% identity) | M.Rsp111151ORF4685P | |
| 4690 | 434 aa hypothetical protein | |||
| 10420 | TonB-dependent receptor | |||
| ??? | M | M.GanTH22ORF3925P (73% identity) | M.Rsp111151ORF10425P | |
| 10430 | 209 aa hypothetical protein | |||
| 10435 | S | S.HinB231ORFEP (37% identity) | S.Rsp111151ORF10425P | |
| 10440 | 303 aa hypothetical protein | |||
| 10445 | transposase | |||
| 10450 | Fic family protein | |||
| 10455 | R | Mca47B2ORF598P (66% identity) | Rsp111151ORF10425P | |
| 10460 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| 11090 | electron transport complex subunit RsxA | |||
| 11095 | R | Ali10568ORF1246P (73% identity) | Rsp111151ORF11120P | |
| 11100 | adenylate cyclase | |||
| 11105 | 177 aa hypothetical protein | |||
| 11110 | S | S.CstSORF1970P (44% identity) | S.Rsp111151ORF11120P | |
| 11115 | Fic family protein | |||
| 11120 | M | M.Aur25976ORF820P (81% identity) | M.Rsp111151ORF11120P | |
| 11125 | TIGR01666 family membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | conjugal transfer protein | |||
| 1635 | R | Ajo910ORF5P (79% identity) | Rsp111151ORF1640P | |
| 1640 | M | M.MvaF222ORF8865P (49% identity) | M.Rsp111151ORF1640P | |
| 1645 | TIGR03747 family integrating conjugative element | |||
| 2745 | 107 aa hypothetical protein | |||
| 2750 | M | M.HinV2ORF9020P (94% identity) | M.Rsp111151ORF2750P | |
| 2755 | type II toxin-antitoxin system HicA family | |||
| 6450 | HipA domain-containing protein | |||
| 6455 | M | M1.Hha8540ORF1171P (68% identity) | M1.Rsp111151ORF6455P | |
| 6460 | M | M2.Orh174bORF7445P (61% identity) | M2.Rsp111151ORF6455P | |
| 6465 | FRG domain-containing protein | |||
| 6470 | RM | Btr190ORF20590P (77% identity) | Rsp111151ORF6455P | |
| 6475 | putrescine-ornithine antiporter | |||
| 9170 | helix-turn-helix transcriptional regulator | |||
| 9175 | R | M.Pmu385ORF3440P (27% identity) | Rsp111151ORF9180P | |
| 9180 | M | M.Pda43325ORF1059P (92% identity) | M.Rsp111151ORF9180P | |
| 9185 | protein-ADP-ribose hydrolase | |||
| 9835 | AAA family ATPase | |||
| 9840 | M | M.Rpn8284ORF1847P (65% identity) | M.Rsp111151ORF9840P | |
| 9845 | DUF1367 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11405 | transcription elongation factor GreA | |||
| 11410 | M | M.AacAA1ORF8383P (49% identity) | M.Rsp111151ORF11410P | |
| 11415 | R | Aac139BORFLP (74% identity) | Rsp111151ORF11410P | |
| 11420 | DEAD/DEAH box helicase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8445 | DUF721 domain-containing protein | |||
| ??? | M | M.RheG1III (90% identity) | M.Rsp111151ORF8450P | |
| 8455 | 3-dehydroquinate synthase | |||