Escherichia coli O157:H7 Wll001 |
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Putative Escherichia coli O157:H7 Wll001 RM systems
Ref: Wang,L. unpublished
REBASE ref # 29098
| Sequence length: | GenBank #: | |
| Chromosome: | 5,487,634 bp | CP064167 |
| plasmid unnamed2: | 95,164 bp | CP064169 |
REBASE acronym: Eco11001
Org_num: 45832
All begin IMX21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11875 | DUF262 domain-containing protein | |||
| 11880 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco11001ORF11885P |
| 11885 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco11001ORF11885P |
| 11890 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco11001ORF11885P |
| 11895 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1240 | TrmB family transcriptional regulator | |||
| 1245 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco11001ORF1245P | |
| 1260 | DUF1737 domain-containing protein | |||
| 2120 | 81 aa hypothetical protein | |||
| 2125 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco11001ORF2125P | |
| 2130 | 329 aa hypothetical protein | |||
| 2135 | R | Ecos15739ORF2910P (100% identity) | Eco11001ORF2125P | |
| 2140 | DUF1367 family protein | |||
| 5900 | drug/metabolite exporter YedA | |||
| 5905 | V | V.EcosPA8DcmP (100% identity) | V.Eco11001DcmP | |
| 5910 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco11001DcmP |
| 5915 | phosphohydrolase | |||
| 12110 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco11001ORF12110P |
| 12115 | DEAD/DEAH box helicase | |||
| 12145 | N-acetylneuraminic acid mutarotase | |||
| 12150 | R | Ecos1613ORF26795P (100% identity) | Eco11001ORF12150P | |
| 12155 | transposase | |||
| 17150 | cell division protein DamX | |||
| 17155 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11001DamP |
| 17160 | ribulose-phosphate 3-epimerase | |||
| 17665 | DUF2556 family protein | |||
| 17670 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco11001ORF17670P |
| 17675 | DNA-binding transcriptional regulator Fis | |||
| 23865 | recombination protein NinB | |||
| 23870 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco11001ORF23870P |
| 23875 | NinE family protein | |||
| 25540 | recombination protein NinB | |||
| 25545 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco11001ORF25545P |
| 25550 | NinE family protein | |||
| plasmid unnamed2 | ||||
| 27550 | 73 aa hypothetical protein | |||
| 27555 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco11001ORF27555P | |
| 27560 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11895 | endoribonuclease SymE | |||
| 11900 | R | EcosPA8GmrSDP (55% identity) | Eco11001GmrDP | |
| 11905 | R | Ecos1613GmrSP (100% identity) | Eco11001GmrSP | |
| 11910 | DUF1127 domain-containing protein | |||