Riemerella anatipestifer RCAD0392 |
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Putative Riemerella anatipestifer RCAD0392 RM systems
Ref: Yang,Z. et al. unpublished
REBASE ref # 31553
Complete sequence: 2,161,891 bp
GenBank #: CP031845
REBASE acronym: Ran392
Org_num: 45814
All begin D1J34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2995 | IS982-like element ISRa1 family transposase | |||
| 3000 | M | M.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | M.Ran392ORF3000P |
| 3005 | S | S.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | S.Ran392ORF3000P |
| 3010 | R | RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | Ran392ORF3000P |
| 3015 | endonuclease/exonuclease/phosphatase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 395 | 128 aa hypothetical protein | |||
| 400 | RM | RanYb2ORF5990P (100% identity) | GAAAGAG | Ran392ORF400P |
| 405 | 213 aa hypothetical protein | |||
| 1575 | 162 aa hypothetical protein | |||
| 1580 | R | RanYb2ORF4780P (100% identity) | GAATTC | Ran392ORF1585P |
| 1585 | M | M.RanYb2ORF4780P (100% identity) | GAATTC | M.Ran392ORF1585P |
| 1590 | ATPase | |||
| 3290 | 187 aa hypothetical protein | |||
| 3295 | M | M1.RanYb2ORF9550P (100% identity) | GGATG | M1.Ran392ORF3295P |
| 3300 | M | M2.RanYb2ORF9550P (100% identity) | GGATG | M2.Ran392ORF3295P |
| 3305 | R | RanYb2ORF9550P (100% identity) | GGATG | Ran392ORF3295P |
| 3310 | DUF4469 domain-containing protein | |||
| 3485 | 125 aa hypothetical protein | |||
| 3490 | M | M1.RanYb2ORF9770P (100% identity) | M1.Ran392ORF3490P | |
| 3495 | R | RanYb2ORF9770P (100% identity) | Ran392ORF3490P | |
| 3500 | M | M2.RanYb2ORF9770P (100% identity) | M2.Ran392ORF3490P | |
| 3505 | GLPGLI family protein | |||
| 7130 | universal stress protein | |||
| 7135 | M | M.RanYMDndCP (100% identity) | GAAC | M.Ran392DndCP |
| 7140 | DNA sulfur modification protein DndD | |||
| 7135 | DNA phosphorothioation system sulfurtransferase | |||
| 7140 | M | M.RanYMDndDP (100% identity) | GAAC | M.Ran392DndDP |
| 7145 | DUF1832 domain-containing protein | |||
| 7140 | DNA sulfur modification protein DndD | |||
| 7145 | M | M.RanYMDndEP (100% identity) | GAAC | M.Ran392DndEP |
| 7150 | 210 aa hypothetical protein | |||