Escherichia coli JE86-ST05 |
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Putative Escherichia coli JE86-ST05 RM systems
Ref: Kimata,K. et al. Sci Rep 10 (1), 11738 (2020)
REBASE ref # 31495
| Sequence length: | GenBank #: | |
| Chromosome: | 5,327,513 bp | AP022815 |
| plasmid JE86-ST05_p1: | 114,953 bp | AP022816 |
| plasmid JE86-ST05_p2: | 85,841 bp | AP022817 |
| plasmid JE86-ST05_p3: | 48,666 bp | AP022818 |
REBASE acronym: EcoST05
Org_num: 45567
All begin JE86ST05C_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2740 | 57 aa hypothetical protein | |||
| 2750 | M | M.EcoST02ORF2710P (100% identity) | GATC | M.EcoST05ORF2750P |
| 2760 | repressor | |||
| 9030 | recombination protein | |||
| 9040 | M | M.EcoST02ORF8510P (100% identity) | GATC | M.EcoST05ORF9040P |
| 9050 | 113 aa hypothetical protein | |||
| 11630 | 65 aa hypothetical protein | |||
| 11640 | M | M.EcoST02ORF11690P (100% identity) | M.EcoST05ORF11640P | |
| 11650 | TciA/TerB-like protein | |||
| 12370 | 70 aa hypothetical protein | |||
| 12380 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.EcoST05ORF12380P |
| 12390 | regulatory protein | |||
| 12550 | 215 aa hypothetical protein | |||
| 12560 | R | Sso1099IP (100% identity) | CTGCAG | EcoST05ORF12570P |
| 12570 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcoST05ORF12570P |
| 12580 | phage repressor protein CI | |||
| 16270 | 65 aa hypothetical protein | |||
| 16280 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoST05ORF16280P |
| 16290 | 617 aa hypothetical protein | |||
| 24440 | amino acid exporter for phenylalanine | |||
| 24450 | V | V.SsoST152DcmP (100% identity) | V.EcoST05DcmP | |
| 24460 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.EcoST05DcmP |
| 24470 | HD superfamily phosphohydrolase | |||
| 37390 | global DNA-binding transcriptional dual | |||
| 37400 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.EcoST05ORF37400P |
| 37410 | transcriptional regulator | |||
| 38380 | D-ribulose-5-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoST05DamP |
| 38400 | cell division protein DamX | |||
| plasmid JE86-ST05_p1 | ||||
| 1150 | 73 aa hypothetical protein | |||
| 1160 | M | M.EcopO86ORFAP (100% identity) | SAY | M.EcoST05ORF1160P |
| 1170 | 308 aa hypothetical protein | |||
| plasmid JE86-ST05_p2 | ||||
| 130 | 300 aa hypothetical protein | |||
| 140 | M | M.Sso866ORF27155P (100% identity) | M.EcoST05ORF140P | |
| 150 | 73 aa hypothetical protein | |||
| plasmid JE86-ST05_p3 | ||||
| 320 | 89 aa hypothetical protein | |||
| 330 | M | M.EcoZLWTORF24570P (100% identity) | M.EcoST05ORF330P | |
| 340 | 69 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 50210 | Helicase | |||
| 50220 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoST05ORF50220P |
| 50230 | R | SflN116ORF19490P (100% identity) | GAACC | EcoST05ORF50220P |
| 50240 | 100 aa hypothetical protein | |||