Escherichia coli JE86-ST02 |
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Putative Escherichia coli JE86-ST02 RM systems
Ref: Kimata,K. et al. Sci Rep 10 (1), 11738 (2020)
REBASE ref # 31495
| Sequence length: | GenBank #: | |
| Chromosome: | 5,283,470 bp | AP022811 |
| plasmid JE86-ST02_p1: | 114,901 bp | AP022812 |
| plasmid JE86-ST02_p2: | 83,276 bp | AP022813 |
| plasmid JE86-ST02_p3: | 48,397 bp | AP022814 |
REBASE acronym: EcoST02
Org_num: 45566
All begin JE86ST02C_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2700 | 162 aa hypothetical protein | |||
| 2710 | M | M.EcoST05ORF2750P (100% identity) | GATC | M.EcoST02ORF2710P |
| 2720 | repressor | |||
| 8500 | recombination protein | |||
| 8510 | M | M.EcoST05ORF9040P (100% identity) | GATC | M.EcoST02ORF8510P |
| 8520 | 113 aa hypothetical protein | |||
| 11130 | 65 aa hypothetical protein | |||
| 11140 | M | M.EcoST02ORF12350P (100% identity) | A | M.EcoST02ORF11140P |
| 11150 | 620 aa hypothetical protein | |||
| 11680 | 65 aa hypothetical protein | |||
| 11690 | M | M.EcoST05ORF11640P (100% identity) | M.EcoST02ORF11690P | |
| 11700 | TciA/TerB-like protein | |||
| 12340 | 65 aa hypothetical protein | |||
| 12350 | M | M.EcoST02ORF11140P (100% identity) | A | M.EcoST02ORF12350P |
| 12360 | 620 aa hypothetical protein | |||
| 16140 | 65 aa hypothetical protein | |||
| 16150 | M | M.Spn7978ORF3515P (100% identity) | A | M.EcoST02ORF16150P |
| 16160 | 617 aa hypothetical protein | |||
| 23480 | amino acid exporter for phenylalanine | |||
| 23490 | V | V.SsoST152DcmP (100% identity) | V.EcoST02DcmP | |
| 23500 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.EcoST02DcmP |
| 23510 | HD superfamily phosphohydrolase | |||
| 37360 | global DNA-binding transcriptional dual | |||
| 37370 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoST02ORF37370P |
| 37380 | transcriptional regulator | |||
| 38350 | D-ribulose-5-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoST02DamP |
| 38370 | cell division protein DamX | |||
| plasmid JE86-ST02_p1 | ||||
| 1130 | 73 aa hypothetical protein | |||
| 1140 | M | M.EcopO86ORFAP (100% identity) | SAY | M.EcoST02ORF1140P |
| 1150 | 300 aa hypothetical protein | |||
| plasmid JE86-ST02_p2 | ||||
| 130 | 300 aa hypothetical protein | |||
| 140 | M | M.Sso866ORF27155P (100% identity) | M.EcoST02ORF140P | |
| 150 | 73 aa hypothetical protein | |||
| plasmid JE86-ST02_p3 | ||||
| 330 | 69 aa hypothetical protein | |||
| 340 | M | M.EcoZLWTORF24570P (100% identity) | M.EcoST02ORF340P | |
| 350 | 89 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24070 | pilus assembly protein PilV | |||
| 24080 | R | Sensp14178ORF9290P (100% identity) | EcoST02ORF24120P | |
| 24090 | M | M.KpnB86ORF475P (73% identity) | M.EcoST02ORF24120BP | |
| 24100 | IS1 family transposase InsB | |||
| 24110 | transposase | |||
| 24120 | M | M.KpnB86ORF475P (23% identity) | M.EcoST02ORF24120AP | |
| 24130 | integrase | |||
| 49140 | Helicase | |||
| 49150 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoST02ORF49150P |
| 49160 | R | SflN116ORF19490P (100% identity) | GAACC | EcoST02ORF49150P |
| 49170 | 100 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 28130 | phage protein NinF | |||
| 28140 | M | M.EcoPhi86Dam2P (100% identity) | GATC | M.EcoST02ORF28140P |
| 28150 | endonuclease | |||
| 28470 | 67 aa hypothetical protein | |||
| 28480 | M | M.EcoPhi86DamP (100% identity) | GATC | M.EcoST02ORF28480P |
| 28490 | 122 aa hypothetical protein | |||