Escherichia coli 1409 |
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Putative Escherichia coli 1409 RM systems
Ref: Rhoads,D. and Ekesi,N.S. unpublished
REBASE ref # 31493
Complete sequence: 4,838,546 bp
GenBank #: CP063369
REBASE acronym: Eco1409
Org_num: 45557
All begin FOI11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3430 | 375 aa hypothetical protein | |||
| 3435 | M | M.EcoH227ORFDP (100% identity) | M.Eco1409ORF3435P | |
| 3440 | S | S.EcoH227ORFDP (100% identity) | S.Eco1409ORF3435P | |
| 3445 | YecA family protein | |||
| 3450 | R | EcoH227ORFDP (99% identity) | Eco1409ORF3435P | |
| 3455 | M48 family metallopeptidase | |||
| 14035 | DUF262 domain-containing protein | |||
| 14040 | R | EcoPSJ12ORF22640P (100% identity) | Eco1409ORF14045P | |
| 14045 | M | M.EcoPSJ12ORF22640P (64% identity) | M.Eco1409ORF14045AP | |
| 14050 | IS3-like element IS3 family transposase | |||
| 14055 | M | M.EcoYPE10ORF21230P (78% identity) | M.Eco1409ORF14045BP | |
| 14060 | S | S.EcoYPE10ORF21230P (100% identity) | S.Eco1409ORF14045P | |
| 14065 | endoribonuclease SymE | |||
| 14265 | DUF4942 domain-containing protein | |||
| 14270 | M | M.EcoMB20ORF19675P (90% identity) | M.Eco1409ORF14270P | |
| 14275 | IS3-like element IS3 family transposase | |||
| 14280 | S | S.EcoPC2ORF20075P (100% identity) | S.Eco1409ORF14270P | |
| 14285 | R | EcoYPE3ORF20380P (99% identity) | Eco1409ORF14270P | |
| 14295 | NADPH-dependent aldehyde reductase Ahr | |||
| 21175 | transposase | |||
| 21180 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco1409ORF21185P |
| 21185 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco1409ORF21185P |
| 21190 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco1409ORF21185P |
| 21195 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3095 | phosphohydrolase | |||
| 3100 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco1409DcmP |
| 3105 | V | V.SsoSE61DcmP (100% identity) | V.Eco1409DcmP | |
| 3110 | drug/metabolite exporter YedA | |||
| 9100 | replication endonuclease | |||
| 9105 | M | M.EcohubtORF7795P (99% identity) | GATC | M.Eco1409ORF9105P |
| 9110 | TraR/DksA family transcriptional regulator | |||
| 12310 | LexA family transcriptional regulator | |||
| 12315 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco1409ORF12315P |
| 12320 | PerC family transcriptional regulator | |||
| 14245 | HNH endonuclease | |||
| 14250 | R | SflFF17ORF19275P (100% identity) | Eco1409ORF14250P | |
| 14255 | McrC family protein | |||
| 18825 | cell division protein DamX | |||
| 18830 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1409DamP |
| 18835 | ribulose-phosphate 3-epimerase | |||
| 19450 | DUF2556 family protein | |||
| 19455 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1409ORF19455P |
| 19460 | DNA-binding transcriptional regulator Fis | |||
| 22940 | DUF3850 domain-containing protein | |||
| 22945 | M | M.EcoSH3ORF6875P (100% identity) | GATC | M.Eco1409ORF22945P |
| 22950 | replication endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14065 | endoribonuclease SymE | |||
| 14070 | R | EcoSTEC508GmrSDP (100% identity) | Eco1409GmrSDP | |
| 14075 | DUF1127 domain-containing protein | |||