Escherichia coli 2492 |
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Putative Escherichia coli 2492 RM systems
Ref: He,X. unpublished
REBASE ref # 30080
| Sequence length: | GenBank #: | |
| Chromosome: | 4,807,625 bp | CP044021 |
| plasmid p2492-1: | 114,184 bp | CP044022 |
| plasmid p2492-3: | 66,137 bp | CP044024 |
REBASE acronym: Eco2492
Org_num: 45565
All begin F3K31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7170 | 322 aa hypothetical protein | |||
| 7175 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco2492ORF7180P |
| 7180 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco2492ORF7180P |
| ??? | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco2492ORF7180P |
| 7195 | endoribonuclease SymE | |||
| 11045 | DNA-binding protein | |||
| ??? | M | M.EcoS19651ORF13565P (99% identity) | GACNNNNNTRRG | M.Eco2492ORF11050P |
| 11055 | S | S.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | S.Eco2492ORF11050P |
| 11060 | R | EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | Eco2492ORF11050P |
| 11065 | lactate utilization protein C | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7390 | HNH endonuclease | |||
| 7395 | R | EcoSTEC405ORF22075P (95% identity) | Eco2492ORF7395P | |
| 7400 | AAA domain-containing protein | |||
| 7590 | sodium/glutamate symporter | |||
| 7595 | R | SflFF24DptFP (100% identity) | Eco2492DptFP | |
| 7600 | integrase | |||
| 12775 | cell division protein DamX | |||
| 12780 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2492DamP |
| 12785 | ribulose-phosphate 3-epimerase | |||
| 13305 | DUF2556 domain-containing protein | |||
| 13310 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco2492ORF13310P |
| 13315 | DNA-binding transcriptional regulator Fis | |||
| 20550 | phosphohydrolase | |||
| 20555 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco2492DcmP |
| 20560 | V | V.SsoSE61DcmP (100% identity) | V.Eco2492DcmP | |
| 20565 | drug/metabolite exporter YedA | |||
| plasmid p2492-1 | ||||
| 24315 | 102 aa hypothetical protein | |||
| ??? | M | M.Sfl1508ORF27300P (96% identity) | M.Eco2492ORF24320P | |
| 24325 | 73 aa hypothetical protein | |||
| plasmid p2492-3 | ||||
| 25485 | 73 aa hypothetical protein | |||
| 25490 | M | M.Xca80ORFEP (100% identity) | M.Eco2492ORF25490P | |
| 25495 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7195 | endoribonuclease SymE | |||
| 7200 | R | Ecos673GmrDP (99% identity) | Eco2492GmrDP | |
| 7205 | R | SflN101GmrSP (100% identity) | Eco2492GmrSP | |
| 7210 | DUF1127 domain-containing protein | |||
| 7395 | HNH endonuclease | |||
| 7400 | R | SflN101McrBP (98% identity) | Eco2492McrBP | |
| 7405 | R | SflN101McrCP (100% identity) | Eco2492McrCP | |
| 7410 | 128 aa hypothetical protein | |||