Clostridioides difficile CFSAN096664 |
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Putative Clostridioides difficile CFSAN096664 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 31491
Complete sequence: 4,313,277 bp
GenBank #: CP049958
REBASE acronym: Cdi96664
Org_num: 45555
All begin GLV80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2870 | 81 aa hypothetical protein | |||
| 2875 | M | M.CdiRSS2ORF3900P (100% identity) | AYGNNNNNNCTG | M.Cdi96664ORF2875P |
| 2880 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi96664ORF2875P |
| 2885 | 150 aa hypothetical protein | |||
| 2890 | 106 aa hypothetical protein | |||
| 2895 | 300 aa hypothetical protein | |||
| 2900 | R | CdiS0942ORF16230P (100% identity) | AYGNNNNNNCTG | Cdi96664ORF2875P |
| 2905 | 47 aa hypothetical protein | |||
| 3390 | tagatose-bisphosphate aldolase subunit GatY | |||
| 3395 | M | M.Pdi6602ORF710241P (100% identity) | GCAYNNNNNNTTC | M.Cdi96664ORF3395P |
| 3400 | S | S.Pdi6602ORF710241P (100% identity) | GCAYNNNNNNTTC | S.Cdi96664ORF3395P |
| 3405 | 102 aa hypothetical protein | |||
| 3410 | nucleotidyltransferase domain-containing | |||
| 3415 | 142 aa hypothetical protein | |||
| 3420 | R | CdiRSS2ORF4450P (100% identity) | GCAYNNNNNNTTC | Cdi96664ORF3395P |
| 3425 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1335 | 118 aa hypothetical protein | |||
| 1340 | M | M.CdiRSS2ORF19340P (100% identity) | M.Cdi96664ORF1340P | |
| 1345 | antirestriction protein ArdA | |||
| 1435 | 288 aa hypothetical protein | |||
| 1440 | M | M.Isp26ORF4990P (82% identity) | M.Cdi96664ORF1440P | |
| 1445 | septation protein SpoVG family protein | |||
| 4690 | Rrf2 family transcriptional regulator | |||
| 4695 | M | M.Pdi9689I (100% identity) | CAAAAA | M.Cdi96664ORF4695P |
| 4700 | patatin-like phospholipase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8155 | cell division protein | |||
| 8160 | R | CdiRSS2McrBP (100% identity) | Cdi96664McrBP | |
| 8165 | R | Pdi6602McrCP (100% identity) | Cdi96664McrCP | |
| 8170 | sigma 54-interacting transcriptional regulator | |||