Escherichia coli 18SC05VL02-EC |
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Putative Escherichia coli 18SC05VL02-EC RM systems
Ref: Tate,H. et al. unpublished
REBASE ref # 31494
| Sequence length: | GenBank #: | |
| Chromosome: | 5,156,783 bp | CP063736 |
| plasmid pVPS18EC0505-2: | 101,737 bp | CP063731 |
| plasmid pVPS18EC0505-3: | 95,635 bp | CP063732 |
REBASE acronym: EcoVL02
Org_num: 45563
All begin IO772_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7355 | IS1 family transposase | |||
| 7360 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoVL02ORF7370P |
| 7365 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoVL02ORF7370P |
| ??? | M | M.EcoEC180ORF5730P (100% identity) | ACAYNNNNCTG | M.EcoVL02ORF7370P |
| 7375 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3175 | cell division protein DamX | |||
| 3180 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoVL02DamP |
| 3185 | ribulose-phosphate 3-epimerase | |||
| 3800 | DUF2556 family protein | |||
| 3805 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoVL02ORF3805P |
| 3810 | DNA-binding transcriptional regulator Fis | |||
| 7475 | 257 aa hypothetical protein | |||
| 7480 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoVL02ORF7480P | |
| 7485 | R | Sso8033ORF3755P (100% identity) | EcoVL02ORF7480P | |
| 7490 | 121 aa hypothetical protein | |||
| 8225 | DUF1382 family protein | |||
| 8230 | M | M.Eco624ORF4330P (99% identity) | M.EcoVL02ORF8230P | |
| 8235 | PerC family transcriptional regulator | |||
| 9320 | recombination protein NinB | |||
| 9325 | M | M.EcoP019ORF4698P (100% identity) | GATC | M.EcoVL02ORF9325P |
| 9330 | NinE family protein | |||
| 11725 | phosphohydrolase | |||
| 11730 | M | M.EcoEC361DcmP (100% identity) | CCWGG | M.EcoVL02DcmP |
| 11735 | V | V.EcosPA11DcmP (100% identity) | V.EcoVL02DcmP | |
| 11740 | drug/metabolite exporter YedA | |||
| 15295 | DUF3927 family protein | |||
| 15310 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoVL02ORF15310P |
| 15315 | TrmB family transcriptional regulator | |||
| 18015 | 401 aa hypothetical protein | |||
| 18020 | M | M.EcoM17ORF8160P (100% identity) | M.EcoVL02ORF18020P | |
| 18025 | holin | |||
| plasmid pVPS18EC0505-2 | ||||
| 175 | 104 aa hypothetical protein | |||
| 180 | M | M.Sso866ORF27155P (100% identity) | M.EcoVL02ORF180P | |
| 185 | 73 aa hypothetical protein | |||
| plasmid pVPS18EC0505-3 | ||||
| 1115 | 85 aa hypothetical protein | |||
| 1120 | M | M.EcoZYB62ORF24960P (100% identity) | M.EcoVL02ORF1120P | |
| 1125 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10395 | recombinase family protein | |||
| 10400 | R | Ecochi7122GmrSDP (99% identity) | EcoVL02GmrSDP | |
| 10405 | DinI-like family protein | |||