Haloferax gibbonsii LR2-5 |
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Putative Haloferax gibbonsii LR2-5 RM systems
Ref: Tittes,C. et al. bioRxiv (2020)
REBASE ref # 31456
| Sequence length: | GenBank #: | |
| Chromosome: | 2,999,641 bp | CP063205 |
| plasmid pHGLR1: | 608,598 bp | CP063206 |
| plasmid pHGLR3: | 65,035 bp | CP063208 |
REBASE acronym: HgiLR25
Org_num: 45445
All begin HfgLR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1365 | DUF45 family protein | |||
| 1370 | R | HarZS10ORFDP (90% identity) | HgiLR25ORF1380P | |
| 1375 | S | S.SdeNi13ORF470P (20% identity) | S.HgiLR25ORF1380P | |
| 1380 | M | M.HarZS10ORFDP (73% identity) | M.HgiLR25ORF1380P | |
| 1385 | uncharacterized protein | |||
| plasmid pHGLR3 | ||||
| 25215 | uncharacterized protein | |||
| 25220 | M | M.Hsa30072ORFEP (44% identity) | M.HgiLR25ORF25220P | |
| 25225 | DUF45 family protein | |||
| 25225 | DUF45 family protein | |||
| 25230 | R | HspGDY1ORFAP (95% identity) | HgiLR25ORF25240P | |
| 25235 | S | S.Nar101ORFCP (59% identity) | S.HgiLR25ORF25240P | |
| 25240 | M | M.Hsp1230ORF13535P (94% identity) | M.HgiLR25ORF25240P | |
| 25245 | XerC/D-like integrase (nonfunctional) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4015 | small CPxCG-related zinc finger protein | |||
| 4020 | M | M.HgiARA6ORF3790P (99% identity) | M.HgiLR25ORF4020P | |
| 4025 | transcription initiation factor TFB | |||
| plasmid pHGLR1 | ||||
| 21955 | S-adenosylmethionine-dependent | |||
| 21960 | M | M.HarEstORF3080P (85% identity) | M.HgiLR25ORF21960P | |
| 21965 | DUF262/DUF1524 domain protein (nonfunctional) | |||