Helicobacter cinaedi D7095 |
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Putative Helicobacter cinaedi D7095 RM systems
Ref: Lane,C. unpublished
REBASE ref # 31448
Complete sequence: 2,228,396 bp
GenBank #: CP063081
REBASE acronym: Hci7095
Org_num: 45448
All begin HW260_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10500 | Crp/Fnr family transcriptional regulator | |||
| 10505 | M | M.HciORF2281P (100% identity) | M.Hci7095ORF10505P | |
| 10510 | S | S.HciORF2281P (100% identity) | S.Hci7095ORF10505P | |
| 10515 | 206 aa hypothetical protein | |||
| 10520 | R | HciORF2281P (99% identity) | Hci7095ORF10505P | |
| 10525 | cation transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | class II aldolase/adducin family protein | |||
| 55 | R | HciORF2076P (100% identity) | Hci7095ORF60P | |
| 60 | M | M.HciORF2076P (100% identity) | M.Hci7095ORF60P | |
| 65 | 53 aa hypothetical protein | |||
| 640 | alanine--tRNA ligase | |||
| 645 | M | M.HciP01DORFMP (100% identity) | M.Hci7095ORF645P | |
| 650 | 359 aa hypothetical protein | |||
| 655 | R | HciORF1958P (100% identity) | Hci7095ORF645P | |
| 660 | site-specific DNA-methyltransferase | |||
| 655 | 575 aa hypothetical protein | |||
| ??? | M | M2.Hci18818ORF359P (100% identity) | M1.Hci7095ORF660P | |
| 665 | M | M1.HciORF1953P (100% identity) | M2.Hci7095ORF660P | |
| ??? | R | Hci1432ORFUP (100% identity) | Hci7095ORF660P | |
| 675 | paraslipin | |||
| 805 | 173 aa hypothetical protein | |||
| 810 | RM | HciORF1922P (100% identity) | Hci7095ORF810P | |
| 815 | 106 aa hypothetical protein | |||
| 1550 | 242 aa hypothetical protein | |||
| 1555 | RM | HciORF1773P (100% identity) | Hci7095ORF1555P | |
| 1560 | type II toxin-antitoxin system HicB family | |||
| 2945 | 162 aa hypothetical protein | |||
| 2950 | M | M.Hci798ORFDP (100% identity) | M.Hci7095ORF2950P | |
| 2955 | R | HciORF1543P (100% identity) | Hci7095ORF2950P | |
| 2960 | 51 aa hypothetical protein | |||
| 4815 | lipoprotein signal peptidase | |||
| ??? | RM | Hci611ORF903P (99% identity) | Hci7095ORF4820P | |
| 4830 | RNA helicase | |||
| 4955 | adenine specific DNA methyltransferase | |||
| 4960 | RM | HciORF1047P (98% identity) | Hci7095ORF4960P | |
| 4965 | arginyltransferase | |||
| 5435 | RDD family protein | |||
| 5440 | M | M.Hci629ORFTP (100% identity) | M.Hci7095ORF5440P | |
| 5445 | DUF262 domain-containing protein | |||
| 5525 | glutamine-hydrolyzing GMP synthase | |||
| 5530 | M | M.HciORF922P (100% identity) | M.Hci7095ORF5530P | |
| ??? | R | HciORF922P (99% identity) | Hci7095ORF5530P | |
| 5540 | [cytidine(C)-cytidine(C)-adenosine (A)]-adding | |||
| 6140 | PLP-dependent transferase | |||
| 6145 | M | M.HciORF793P (100% identity) | M.Hci7095ORF6145P | |
| ??? | R | HciORF793P (99% identity) | Hci7095ORF6145P | |
| 6160 | cysteine synthase family protein | |||
| 6170 | 223 aa hypothetical protein | |||
| 6175 | M | M.HciORF787P (100% identity) | M.Hci7095ORF6175P | |
| 6180 | 54 aa hypothetical protein | |||
| 6180 | 54 aa hypothetical protein | |||
| ??? | M | M.Hci1432ORFOP (100% identity) | M.Hci7095ORF6185P | |
| 6190 | HNH endonuclease | |||
| 6375 | flagellin modification protein PseA | |||
| 6380 | R | HciORF741P (100% identity) | Hci7095ORF6385P | |
| 6385 | M | M.HciORF741P (100% identity) | M.Hci7095ORF6385P | |
| 6390 | cell division protein FtsW | |||
| 7665 | cysteine desulfurase, NifS family | |||
| ??? | M | M.Hci197ORF1075P (100% identity) | M.Hci7095ORF7670P | |
| 7675 | R | HciORF474P (100% identity) | Hci7095ORF7670P | |
| 7680 | iron-sulfur cluster assembly scaffold protein | |||
| 8125 | 249 aa hypothetical protein | |||
| 8130 | M | M.HciP01DORFBP (100% identity) | M.Hci7095ORF8130P | |
| 8135 | class I SAM-dependent methyltransferase | |||
| 9545 | 30S ribosomal protein S2 | |||
| 9550 | M | M.HciORF102P (100% identity) | M.Hci7095ORF9550P | |
| 9555 | heme ABC transporter substrate-binding protein | |||
| 9560 | R | Hci629ORFAP (49% identity) | Hci7095ORF9550P | |
| 9565 | RNA polymerase factor sigma-54 | |||
| 9920 | restriction endonuclease subunit S | |||
| 9925 | RM | Hci1432ORFKP (98% identity) | Hci7095ORF9925P | |
| 9930 | NAD(P)-dependent alcohol dehydrogenase | |||
| 10485 | 4Fe-4S dicluster domain-containing protein | |||
| 10490 | M | M.Hci798ORFGP (97% identity) | M.Hci7095ORF10490P | |
| 10495 | 214 aa hypothetical protein | |||
| 10540 | argininosuccinate synthase | |||
| 10545 | M | M.HciP01DORFGP (100% identity) | M.Hci7095ORF10545P | |
| 10550 | R | HciP01DORFGP (100% identity) | Hci7095ORF10545P | |
| 10555 | septum site-determining protein MinD | |||
| 10915 | MFS transporter | |||
| 10920 | M | M2.HciORF2198P (100% identity) | M1.Hci7095ORF10920P | |
| 10925 | M | M1.HciORF2198P (100% identity) | M2.Hci7095ORF10920P | |
| 10930 | Hpy99I family type II restriction endonuclease | |||
| 10925 | Dam family site-specific | |||
| 10930 | R | HciORF2196P (100% identity) | Hci7095ORF10935P | |
| 10935 | M | M.HciORF2196P (100% identity) | M.Hci7095ORF10935P | |
| 10940 | 79 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3050 | restriction endonuclease | |||
| 3055 | M | M.HciORF1430P (100% identity) | M.Hci7095ORF3055P | |
| 3060 | R | Hci18818ORFZP (100% identity) | Hci7095ORF3055P | |
| 3065 | 45 aa hypothetical protein | |||
| 9735 | cache domain-containing protein | |||
| 9740 | R | Hci60917ORF215P (100% identity) | Hci7095ORF9755P | |
| 9745 | virulence RhuM family protein | |||
| 9750 | ATP-binding protein | |||
| 9755 | M | M.HciORF61P (100% identity) | M.Hci7095ORF9755P | |
| 9760 | saccharopine dehydrogenase family protein | |||
| 10950 | MerR family transcriptional regulator | |||
| 10955 | R | HciORF2191P (100% identity) | Hci7095ORF10960P | |
| 10960 | M | M.Cph21ORF136P (52% identity) | M.Hci7095ORF10960P | |
| 10965 | aldo/keto reductase | |||