Dickeya dianthicola 67-19 |
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Putative Dickeya dianthicola 67-19 RM systems
Ref: Liu,Y. et al. unpublished
REBASE ref # 31394
Complete sequence: 4,851,809 bp
GenBank #: CP051429
REBASE acronym: Ddi6719
Org_num: 45251
All begin HGI48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21715 | restriction system-associated AAA family ATPase | |||
| 21720 | S | S.NeuORF2497P (51% identity) | S.Ddi6719ORF21725P | |
| 21725 | M | M.DzeORF4241P (98% identity) | M.Ddi6719ORF21725P | |
| 21730 | DNA damage-inducible protein D | |||
| 21735 | R | DzeORF4241P (97% identity) | Ddi6719ORF21725P | |
| 21740 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2925 | 3-5 exoribonuclease | |||
| 2930 | M | M2.Daq1742ORF1909P (88% identity) | M.Ddi6719ORF2930P | |
| 2935 | DNA cytosine methyltransferase | |||
| 2930 | Dam family site-specific | |||
| 2935 | M | M1.Daq1742ORF1909P (52% identity) | M.Ddi6719ORF2935P | |
| 2940 | phosphoadenosine phosphosulfate reductase family | |||
| 2945 | replication endonuclease | |||
| 2950 | M | M.Dso5647ORF9150P (70% identity) | M.Ddi6719ORF2950P | |
| 2955 | 52 aa hypothetical protein | |||
| 7080 | SIR2 family protein | |||
| 7085 | M | M.CkoK1818ORF9310P (91% identity) | M.Ddi6719ORF7085P | |
| 7090 | molybdopterin-guanine dinucleotide biosynthesis | |||
| 8345 | relaxase/mobilization nuclease and DUF3363 | |||
| 8350 | R | Dso5647DptFP (97% identity) | Ddi6719DptFP | |
| 8355 | DNA phosphorothioation-dependent restriction | |||
| 8350 | DNA phosphorothioation-dependent restriction | |||
| 8355 | R | Dso5647DptGP (100% identity) | Ddi6719DptGP | |
| 8360 | DNA phosphorothioation-dependent restriction | |||
| 8355 | DNA phosphorothioation-dependent restriction | |||
| 8360 | R | Cbr4C01DptHP (96% identity) | Ddi6719DptHP | |
| 8365 | restriction endonuclease | |||
| 8380 | class I SAM-dependent methyltransferase | |||
| 8385 | M | M.Csa2185DndEP (89% identity) | M.Ddi6719DndEP | |
| 8390 | DNA sulfur modification protein DndD | |||
| 8385 | DNA sulfur modification protein DndE | |||
| 8390 | M | M.DdaS31DndDP (96% identity) | M.Ddi6719DndDP | |
| 8395 | DNA phosphorothioation system sulfurtransferase | |||
| 8390 | DNA sulfur modification protein DndD | |||
| 8395 | M | M.DdaS31DndCP (97% identity) | M.Ddi6719DndCP | |
| 8400 | DNA sulfur modification protein DndB | |||
| 8395 | DNA phosphorothioation system sulfurtransferase | |||
| 8400 | M | M.Dso5647DndBP (99% identity) | M.Ddi6719DndBP | |
| 8405 | helix-turn-helix transcriptional regulator | |||
| 13985 | DUF1738 domain-containing protein | |||
| 13990 | M | M.DchL11ORFGP (98% identity) | M.Ddi6719ORF13990P | |
| 13995 | histidine kinase | |||
| 14000 | 630 aa hypothetical protein | |||
| 14005 | V | V.Dfa643bORF9010P (65% identity) | V.Ddi6719ORF13990P | |
| 14010 | integrase | |||
| 15540 | 109 aa hypothetical protein | |||
| 15545 | M | M.DdiPA24ORF15945P (97% identity) | M.Ddi6719ORF15545P | |
| 15550 | recombinase family protein | |||
| 19690 | ribulose-phosphate 3-epimerase | |||
| 19695 | M | M.Dsp2401ORFJP (99% identity) | GATC | M.Ddi6719DamP |
| 19700 | SPOR domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8365 | R | Dso5647MrrP (94% identity) | Ddi6719MrrP | |
| 8370 | class I SAM-dependent methyltransferase | |||