Ralstonia solanacearum UW763 |
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Putative Ralstonia solanacearum UW763 RM systems
Ref: Steidl,O. et al. unpublished
REBASE ref # 31424
| Sequence length: | GenBank #: | |
| Chromosome: | 3,762,104 bp | CP051173 |
| plasmid pUW763mp: | 2,021,285 bp | CP051174 |
REBASE acronym: RsoUW763
Org_num: 45366
All begin HF907_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 240 | Rrf2 family transcriptional regulator | |||
| 245 | M | M.RsoT02ORFCP (99% identity) | M.RsoUW763ORF245P | |
| 250 | 284 aa hypothetical protein | |||
| 255 | R | RsoM7ORF12260P (88% identity) | RsoUW763ORF245P | |
| 260 | sensor histidine kinase | |||
| 6335 | M48 family metallopeptidase | |||
| 6340 | R | RsoF8ORF13950P (99% identity) | RsoUW763ORF6355P | |
| 6345 | DUF1016 domain-containing protein | |||
| 6350 | S | S.HtaLT2ORF12055P (70% identity) | S1.RsoUW763ORF6355P | |
| 6355 | M | M.RsoF8ORF13950P (98% identity) | M.RsoUW763ORF6355P | |
| 6360 | purine nucleoside permease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 35 | ATP-binding domain-containing protein | |||
| 40 | M | M.RsoRS24ORF30P (94% identity) | M.RsoUW763ORF40P | |
| 45 | R | RsoRS24ORF30P (100% identity) | RsoUW763ORF40P | |
| 50 | 208 aa hypothetical protein | |||
| 55 | V | V.RsoRS24ORF30P (97% identity) | V.RsoUW763ORF40P | |
| 60 | 86 aa hypothetical protein | |||
| 6570 | 135 aa hypothetical protein | |||
| 6575 | M | M1.RsoY45ORFBP (83% identity) | M1.RsoUW763ORF6575P | |
| 6580 | M | M2.Rso244ORFCP (87% identity) | M2.RsoUW763ORF6575P | |
| 6585 | type III effector | |||
| 6685 | type III secretion system YopJ family effector | |||
| 6690 | M | M.RpsPSS4ORFBP (97% identity) | M.RsoUW763ORF6690P | |
| 6695 | type II toxin-antitoxin system VapC family | |||
| 6920 | 135 aa hypothetical protein | |||
| 6925 | M | M2.RsoCQPS1ORF2530P (98% identity) | M1.RsoUW763ORF6925P | |
| 6930 | M | M.Rso644ORFJP (88% identity) | M2.RsoUW763ORF6925P | |
| 6935 | 121 aa hypothetical protein | |||
| 7035 | IS5 family transposase | |||
| 7040 | M | M.RsoYQORF1280P (100% identity) | M.RsoUW763ORF7040P | |
| 7045 | phage tail tape measure protein | |||
| 12190 | tryptophan synthase subunit alpha | |||
| 12195 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.RsoUW763ORF12195P |
| 12200 | tryptophan synthase subunit beta | |||
| 14575 | Com family DNA-binding transcriptional | |||
| 14580 | M | M.Rso211479ORF10730P (94% identity) | M.RsoUW763ORF14580P | |
| 14585 | 122 aa hypothetical protein | |||
| plasmid pUW763mp | ||||
| 21010 | 90 aa hypothetical protein | |||
| ??? | M | M.Rso244ORFIP (99% identity) | M.RsoUW763ORF21020P | |
| 21035 | mannose-binding lectin protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 140 | bifunctional (p)ppGpp | |||
| 145 | R | RsoYQMrrP (100% identity) | RsoUW763MrrP | |
| 150 | O-acetylhomoserine | |||