Escherichia coli isolate 2016-17-550 |
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Putative Escherichia coli isolate 2016-17-550 RM systems
Ref: Haverkamp H.A:,T. unpublished
REBASE ref # 31332
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,712,903 bp | LR883965 |
| plasmid 2: | 104,732 bp | LR883966 |
REBASE acronym: Eco17550
Org_num: 45279
All begin QREC_QR550_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2195 | 128 aa hypothetical protein | |||
| 2196 | M | M.EcoC2ORF14475P (100% identity) | TGANNNNNNTCCA | M.Eco17550ORF2196P |
| 2197 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco17550ORF2196P |
| 2198 | 428 aa hypothetical protein | |||
| plasmid 2 | ||||
| 4525 | 73 aa hypothetical protein | |||
| 4526 | M | M.EcoS321ORF25465P (100% identity) | M.Eco17550ORF4526P | |
| 4527 | S | S.EcoMB50ORF22700P (100% identity) | S.Eco17550ORF4526P | |
| 4528 | R | EcoS321ORF25465P (100% identity) | Eco17550ORF4526P | |
| 4529 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 136 | protein YedJ | |||
| 137 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco17550DcmP |
| 138 | V | V.SsoSE61DcmP (100% identity) | V.Eco17550DcmP | |
| 139 | inner membrane transporter YedA | |||
| 2191 | 9-O-acetyl-N-acetylneuraminic acid | |||
| 2192 | R | Eco5SOC06ORF11700P (100% identity) | Eco17550ORF2192P | |
| 2193 | 691 aa hypothetical protein | |||
| 3136 | Cell division protein DamX | |||
| 3137 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco17550DamP |
| 3138 | Ribulose-phosphate 3-epimerase | |||
| 3248 | 59 aa hypothetical protein | |||
| 3249 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco17550ORF3249P |
| 3250 | DNA-binding protein Fis | |||
| plasmid 2 | ||||
| 4550 | 144 aa hypothetical protein | |||
| 4553 | M | M.Eco5L08ORF20240P (100% identity) | M.Eco17550ORF4553P | |
| 4554 | Recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2192 | 290 aa hypothetical protein | |||
| 2193 | R | SflN101McrBP (100% identity) | Eco17550McrBP | |
| 2194 | R | EcohubtMcrCP (100% identity) | Eco17550McrCP | |
| 2195 | 128 aa hypothetical protein | |||