Escherichia coli K_EC180 |
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Putative Escherichia coli K_EC180 RM systems
Ref: Kim,H.B. unpublished
REBASE ref # 31311
Complete sequence: 5,017,281 bp
GenBank #: CP062203
REBASE acronym: EcoEC180
Org_num: 45268
All begin IGX36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5715 | IS1 family transposase | |||
| 5720 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoEC180ORF5730P |
| 5725 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoEC180ORF5730P |
| ??? | M | M.EcoVL02ORF7370P (100% identity) | ACAYNNNNCTG | M.EcoEC180ORF5730P |
| 5735 | transposase | |||
| 14860 | GTPase family protein | |||
| 14865 | M | M.EcoW1316ORF930P (100% identity) | M.EcoEC180ORF14865P | |
| 14870 | S | S.EcoW1316ORF930P (100% identity) | S.EcoEC180ORF14865P | |
| 14875 | R | EcoW1316ORF930P (100% identity) | EcoEC180ORF14865P | |
| 14880 | IS5-like element ISKpn26 family transposase | |||
| 19095 | type IV toxin-antitoxin system AbiEi family | |||
| 19100 | R | EcoP1525ORF5305P (100% identity) | EcoEC180ORF19105P | |
| 19105 | M | M.EcoW1316ORF21120P (99% identity) | M.EcoEC180ORF19105P | |
| 19110 | S | S.EcoW1316ORF21120P (100% identity) | S.EcoEC180ORF19105P | |
| 19115 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1735 | cell division protein DamX | |||
| 1740 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC180DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.EcoW1316ORF13330P (100% identity) | ATGCAT | M.EcoEC180ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 6025 | Com family DNA-binding transcriptional | |||
| 6030 | M | M.EcoC1730ORF6240P (100% identity) | M.EcoEC180ORF6030P | |
| 6035 | ribosome-associated translation inhibitor RaiA | |||
| 6520 | DUF1382 family protein | |||
| 6525 | M | M.SspPIBORF6330P (100% identity) | M.EcoEC180ORF6525P | |
| 6530 | PerC family transcriptional regulator | |||
| 9950 | phosphohydrolase | |||
| 9955 | M | M.EcoW1316DcmP (100% identity) | CCWGG | M.EcoEC180DcmP |
| 9960 | V | V.EcoW1316DcmP (100% identity) | V.EcoEC180DcmP | |
| 9965 | drug/metabolite exporter YedA | |||
| 13585 | Shiga toxin Stx2e subunit A | |||
| 13605 | M | M.EcoW1316ORF2195P (100% identity) | M.EcoEC180ORF13605P | |
| 13610 | TrmB family transcriptional regulator | |||
| 15275 | 92 aa hypothetical protein | |||
| 15280 | M | M.EcoW26ORF35400P (100% identity) | M.EcoEC180ORF15280P | |
| 15285 | TrmB family transcriptional regulator | |||