Escherichia coli C311 |
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Putative Escherichia coli C311 RM systems
Ref: Wright,S.A. et al. unpublished
REBASE ref # 31398
| Sequence length: | GenBank #: | |
| Chromosome: | 5,165,639 bp | CP062204 |
| plasmid p2: | 48,103 bp | CP062206 |
REBASE acronym: EcoC311
Org_num: 45267
All begin IG172_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18905 | transcription factor | |||
| 18910 | M | M.EcoSTEC639ORF18270P (100% identity) | M.EcoC311ORF18910P | |
| 18915 | S | S.EcoSTEC639ORF18270P (100% identity) | S.EcoC311ORF18910P | |
| 18920 | DUF4433 domain-containing protein | |||
| 18925 | macro domain-containing protein | |||
| 18930 | R | EcoSTEC639ORF18270P (100% identity) | EcoC311ORF18910P | |
| 18935 | M48 family metallopeptidase | |||
| 21110 | restriction endonuclease subunit M | |||
| 21115 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.EcoC311ORF21115P |
| 21120 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.EcoC311ORF21115P |
| 21125 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | EcoC311ORF21115P |
| 21130 | integrase | |||
| 21880 | AAA family ATPase | |||
| 21885 | S | S.EcosEC2ORF410P (93% identity) | S.EcoC311ORF21890P | |
| 21890 | M | M.EcosC41ORF22705P (100% identity) | M.EcoC311ORF21890P | |
| 21895 | R | EcosC41ORF22705P (100% identity) | EcoC311ORF21890P | |
| 21900 | 127 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1715 | cell division protein DamX | |||
| 1720 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC311DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoC311ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 6080 | TrmB family transcriptional regulator | |||
| 6085 | M | M.Eco19035ORF11505P (100% identity) | M.EcoC311ORF6085P | |
| 6095 | tellurite/colicin resistance protein | |||
| 9730 | phosphohydrolase | |||
| 9735 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoC311DcmP |
| 9740 | V | V.SsoSE61DcmP (100% identity) | V.EcoC311DcmP | |
| 9745 | drug/metabolite exporter YedA | |||
| 13310 | 92 aa hypothetical protein | |||
| 13315 | M | M.Eco07C22ORF10320P (100% identity) | M.EcoC311ORF13315P | |
| 13320 | TrmB family transcriptional regulator | |||
| 14230 | 76 aa hypothetical protein | |||
| 14235 | M | M.Eco2DORF8560P (99% identity) | M.EcoC311ORF14235P | |
| 14240 | TrmB family transcriptional regulator | |||
| 21085 | HNH endonuclease | |||
| 21090 | R | EcoWCTORF19980P (100% identity) | EcoC311ORF21090P | |
| 21095 | McrC family protein | |||
| 23160 | class II holin family protein | |||
| 23165 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC311ORF23165P | |
| 23170 | TrmB family transcriptional regulator | |||
| 23205 | DNA adenine methylase | |||
| 23210 | M | M.EcoW014ORF8310P (70% identity) | M.EcoC311ORF23210P | |
| 23215 | PerC family transcriptional regulator | |||
| 23270 | Eae protein | |||
| 23275 | M | M.EcoR44ORF23150P (100% identity) | M.EcoC311ORF23275P | |
| 23280 | ead/Ea22-like family protein | |||
| plasmid p2 | ||||
| 26125 | 89 aa hypothetical protein | |||
| 26130 | M | M.Kae61ORF24310P (100% identity) | M.EcoC311ORF26130P | |
| 26140 | 92 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21090 | HNH endonuclease | |||
| 21095 | R | EcoZ151McrCP (100% identity) | EcoC311McrCP | |
| 21100 | R | SflSTLE4McrBP (100% identity) | EcoC311McrBP | |
| 21105 | IS3-like element IS3 family transposase | |||