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Putative Neisseria gonorrhoeae SW0236 RM systems
Ref: Iyer,M.S. et al. unpublished
REBASE ref # 31417
Complete sequence: 2,148,016 bp
GenBank #: CP061485
REBASE acronym: NgoSW0236
Org_num: 45346
All begin IBX82_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2035 | ADP-glyceromanno-heptose 6-epimerase | |||
2040 | M | M.Ngos1291ORF7750P (100% identity) | M.NgoSW0236ORF2040P | |
2045 | DNA damage-inducible protein D | |||
2050 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoSW0236ORF2040P |
2055 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.NgoSW0236ORF2040P |
2060 | R | NgoSW0259ORF2065P (99% identity) | NgoSW0236ORF2040P | |
2065 | ATP-dependent Clp protease ATP-binding subunit | |||
3535 | replication-associated recombination protein A | |||
3540 | R | NgoFQ35ORF5510P (99% identity) | GAGNNNNNTAC | NgoSW0236ORF3565P |
3545 | hydroxyacid dehydrogenase | |||
3550 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoSW0236ORF3565P |
3555 | 186 aa hypothetical protein | |||
3560 | 280 aa hypothetical protein | |||
3565 | M | M.NgoNG250ORF4770P (99% identity) | GAGNNNNNTAC | M.NgoSW0236ORF3565P |
3570 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
??? | R | NgoSW0274ORF40P (100% identity) | GATC | NgoSW0236ORF40P |
45 | site-specific DNA-methyltransferase | |||
40 | restriction endonuclease | |||
??? | M | M.NgoSW0274ORF45P (99% identity) | M.NgoSW0236ORF45P | |
55 | 184 aa hypothetical protein | |||
1510 | phenylalanine--tRNA ligase subunit alpha | |||
1515 | V | V.NgoSW0032ORF1550P (100% identity) | V.NgoSW0236ORF1520P | |
??? | M | M.NgoWSORF391P (100% identity) | M.NgoSW0236ORF1520P | |
1530 | R | Npo18661ORFHP (100% identity) | NgoSW0236ORF1520P | |
1535 | phenylalanine--tRNA ligase subunit beta | |||
1835 | uroporphyrinogen decarboxylase | |||
1840 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoSW0236ORF1850P | |
1845 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoSW0236ORF1850P |
1850 | M | M.Ngos1291ORF7560P (99% identity) | GCSGC | M.NgoSW0236ORF1850P |
??? | 92 aa hypothetical protein TUM15762_01470 | |||
3425 | 3-isopropylmalate dehydrogenase | |||
3430 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoSW0236ORF3435P |
3435 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoSW0236ORF3435P |
3440 | 3-isopropylmalate dehydratase small subunit | |||
4400 | anthranilate synthase component I | |||
4405 | M | M.NgoSW0032ORF4420P (100% identity) | GCCGGC | M.NgoSW0236ORF4405P |
4410 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoSW0236ORF4405P |
4415 | 5-(carboxyamino)imidazole ribonucleotide | |||
5845 | replication initiation factor domain-containing | |||
5850 | V | V.Ngos1291ORF65P (100% identity) | V.NgoSW0236ORF5860P | |
5855 | R | Ngos1291ORF65P (100% identity) | NgoSW0236ORF5860P | |
??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoSW0236ORF5860P | |
5870 | type IV pilin protein | |||
6045 | excinuclease ABC subunit UvrA | |||
6050 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoSW0236ORF6055P |
6055 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoSW0236ORF6055P |
6060 | transposase | |||
9070 | FUSC family protein | |||
9075 | R | NgoFQ48ORF12300P (100% identity) | GGCC | NgoSW0236ORF9080P |
9080 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoSW0236ORF9080P |
9085 | ribosome recycling factor | |||
9620 | 93 aa hypothetical protein | |||
9625 | R | NgoWSIIIP (99% identity) | GGTGA | NgoSW0236ORF9630P |
9630 | M | M1.NgoSW0259ORF9605P (100% identity) | GGTGA | M1.NgoSW0236ORF9630P |
9635 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoSW0236ORF9630P |
9640 | RNA-binding transcriptional accessory protein | |||
10160 | GTPase ObgE | |||
10165 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoSW0236ORF10165P |
10170 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoSW0236ORF10165P |
10175 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2760 | peptidyl-prolyl cis-trans isomerase | |||
2765 | M | M.NgoSW0032ORF2780P (81% identity) | M.NgoSW0236ORF2765P | |
??? | R | NgoWSORF647P (32% identity) | NgoSW0236ORF2765P | |
2775 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3230 | alpha-hydroxy-acid oxidizing protein | |||
3235 | R | NgoWFORF680P (99% identity) | NgoSW0236ORF3240P | |
??? | M | M.NgoSH204ORFKP (99% identity) | M.NgoSW0236ORF3240P | |
3255 | tRNA pseudouridine(55) synthase TruB |