Ref: Revin,V. et al. unpublished

REBASE ref # 31384

Complete sequence: 5,102,828 bp

GenBank #: CP062066

REBASE acronym: XcaM28

Org_num: 45204

 

All begin IFJ81_

Type I
ORF Gene Most similar Specificity Name
 
6485 M48 family metallopeptidase
6490 R XcaSB80ORF6055P (100% identity) CAAGNNNNNCTTA XcaM28ORF6505P
6495 S S.Xcacc2ORF6130P (100% identity) CAAGNNNNNCTTA S.XcaM28ORF6505P
6500 damage-inducible protein D
6505 M M.Xcacc2ORF6130P (100% identity) CAAGNNNNNCTTA M.XcaM28ORF6505P
6510 restriction endonuclease subunit S
Type II
ORF Gene Most similar Specificity Name
 
3080 IS3-like element IS1404 family transposase
3085 R XcaSB80ORF2990P (98% identity) XcaM28ORF3085P
3090 90 aa hypothetical protein
 
19205 DUF4238 domain-containing protein
19210 M M.XcaCORF2967P (94% identity) M.XcaM28ORF19210P
19220 phage portal protein
 
21920 171 aa hypothetical protein
??? M M.XcaXCC1ORFDP (100% identity) M.XcaM28ORF21925P
21930 exodeoxyribonuclease V subunit beta
Type III
ORF Gene Most similar Specificity Name
 
15815 ATP-dependent helicase
15820 M M.XcaXc86ORFDP (94% identity) M.XcaM28ORF15820P
15825 IS5 family transposase
15830 58 aa hypothetical protein
15835 R XcaXc86ORFDP (87% identity) XcaM28ORF15820P
15840 type II toxin-antitoxin system RelE/ParE family
Type IV
ORF Gene Most similar Specificity Name
 
7370 71 aa hypothetical protein
7375 R Xcacc2McrBP (99% identity) XcaM28McrBP
7380 R Xcacc2McrCP (98% identity) XcaM28McrCP
7385 sensor histidine kinase