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Putative Xanthomonas campestris M28 RM systems
Ref: Revin,V. et al. unpublished
REBASE ref # 31384
Complete sequence: 5,102,828 bp
GenBank #: CP062066
REBASE acronym: XcaM28
Org_num: 45204
All begin IFJ81_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
6485 | M48 family metallopeptidase | |||
6490 | R | XcaXY11ORF6160P (100% identity) | CAAGNNNNNCTTA | XcaM28ORF6505P |
6495 | S | S.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | S.XcaM28ORF6505P |
6500 | damage-inducible protein D | |||
6505 | M | M.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | M.XcaM28ORF6505P |
6510 | restriction endonuclease subunit S | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3080 | IS3-like element IS1404 family transposase | |||
3085 | R | XcaYORFAP (98% identity) | XcaM28ORF3085P | |
3090 | 90 aa hypothetical protein | |||
19205 | DUF4238 domain-containing protein | |||
19210 | M | M.XcaCORF2967P (94% identity) | M.XcaM28ORF19210P | |
19220 | phage portal protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
15815 | ATP-dependent helicase | |||
15820 | M | M.XcaXc86ORFDP (94% identity) | M.XcaM28ORF15820P | |
15825 | IS5 family transposase | |||
15830 | 58 aa hypothetical protein | |||
15835 | R | XcaXc86ORFDP (87% identity) | XcaM28ORF15820P | |
15840 | type II toxin-antitoxin system RelE/ParE family | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
7370 | 71 aa hypothetical protein | |||
7375 | R | Xcacc2McrBP (99% identity) | XcaM28McrBP | |
7380 | R | XcaXY11McrCP (100% identity) | XcaM28McrCP | |
7385 | sensor histidine kinase |