Lactobacillus salivarius ZLp4b |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus salivarius ZLp4b RM systems
Ref: Li,Y. et al. unpublished
REBASE ref # 31366
| Sequence length: | GenBank #: | |
| Chromosome: | 2,003,344 bp | CP062071 |
| plasmid unnamed1: | 274,836 bp | CP062072 |
REBASE acronym: LsaZLp4b
Org_num: 45172
All begin IGB11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | Lsacp400ORF1801P (100% identity) | LsaZLp4bORFJP | |
| ??? | S | S.Lsacp400ORF1801P (67% identity) | S.LsaZLp4bORFJP | |
| ??? | M | M.Lsacp400ORF1801P (100% identity) | M.LsaZLp4bORFJP | |
| ??? | M | M.LsaH1ORF8150P (100% identity) | M.LsaZLp4bORFDP | |
| ??? | S | S.LsaH1ORF8150P (100% identity) | S.LsaZLp4bORFDP | |
| ??? | S | S3.Lsa3154ORF1090P (79% identity) | S3.LsaZLp4bORFFP | |
| ??? | S | S2.Lsa3154ORF1090P (87% identity) | S2.LsaZLp4bORFFP | |
| ??? | S | S1.Lsa3154ORF1090P (99% identity) | S1.LsaZLp4bORFFP | |
| ??? | M | M.LsaH1ORF8880P (99% identity) | M.LsaZLp4bORFFP | |
| ??? | R | LsaH1ORF8880P (99% identity) | LsaZLp4bORFFP | |
| plasmid unnamed1 | ||||
| 10340 | 80 aa hypothetical protein | |||
| 10345 | M | M.LsaAR809ORF8845P (98% identity) | M.LsaZLp4bORFGP | |
| 10350 | S | S.LsaH1ORF770P (99% identity) | S.LsaZLp4bORFGP | |
| 10355 | site-specific integrase | |||
| 10950 | restriction endonuclease subunit S | |||
| 10955 | M | M2.Lsa840ORF1791P (99% identity) | M.LsaZLp4bORFHP | |
| 10960 | type I restriction-modification system subunit | |||
| 10955 | SAM-dependent methyltransferase | |||
| 10960 | M | M1.LsaRenORF1788P (100% identity) | M.LsaZLp4bORFIP | |
| 10965 | S | S.Efa456ORFCP (22% identity) | S.LsaZLp4bORFIP | |
| 10970 | R | Lsa006ORF9830P (98% identity) | LsaZLp4bORFIP | |
| 10975 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | type II secretion system F family protein | |||
| 2275 | M | LsaZSA5ORF11055P (64% identity) | M.LsaZLp4bORF2275P | |
| 2280 | 236 aa hypothetical protein | |||
| ??? | RM | LsaZSA5ORF5570P (100% identity) | LsaZLp4bORFAP | |
| ??? | M | M.LsaBNS11ORF10630P (99% identity) | M.LsaZLp4bORFCP | |
| plasmid unnamed1 | ||||
| 10310 | DEAD/DEAH box helicase family protein | |||
| ??? | RM | LsaBNS11ORF11045P (70% identity) | LsaZLp4bORFEBP | |
| 10320 | RM | Lsa840ORF1875P (97% identity) | LsaZLp4bORFEAP | |
| 10325 | 238 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | Lsa006ORF1635P (99% identity) | LsaZLp4bORFBP | |