Escherichia coli K56-43-un |
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Putative Escherichia coli K56-43-un RM systems
Ref: Kloos,J. et al. unpublished
REBASE ref # 31352
Complete sequence: 5,140,708 bp
GenBank #: CP053079
REBASE acronym: EcoK5643
Org_num: 45056
All begin HK408_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1790 | cell division protein DamX | |||
| 1795 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoK5643DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2390 | DUF2556 family protein | |||
| 2395 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoK5643ORF2395P |
| 2400 | DNA-binding transcriptional regulator Fis | |||
| 9875 | phosphohydrolase | |||
| 9880 | M | M.EcoR63DcmP (100% identity) | CCWGG | M.EcoK5643DcmP |
| 9885 | V | V.SflC32DcmP (74% identity) | V.EcoK5643DcmP | |
| 9890 | drug/metabolite exporter YedA | |||
| 15720 | replication endonuclease | |||
| 15725 | M | M.SdyFF10ORF5495P (100% identity) | GATC | M.EcoK5643ORF15725P |
| 15730 | TraR/DksA family transcriptional regulator | |||
| 16325 | protein ninF | |||
| 16330 | M | M1.EcoB0933ORFFP (96% identity) | M.EcoK5643ORF16330P | |
| 16335 | NinE family protein | |||
| 18570 | 71 aa hypothetical protein | |||
| 18575 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoK5643ORF18575P | |
| 18580 | helix-turn-helix domain-containing protein | |||
| 21200 | LexA family transcriptional regulator | |||
| 21205 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.EcoK5643ORF21205P |
| 21210 | PerC family transcriptional regulator | |||
| 21660 | HNH endonuclease | |||
| 21665 | R | Sso8ORF19860P (92% identity) | EcoK5643ORF21665P | |
| 21670 | 332 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21695 | ATP-binding domain-containing protein | |||
| 21700 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoK5643ORF21700P |
| 21705 | R | EcoUTI89IP (100% identity) | CACAG | EcoK5643ORF21700P |
| 21710 | integrase arm-type DNA-binding domain-containing | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14060 | NinE family protein | |||
| 14065 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoK5643ORF14065P |
| 14070 | recombination protein NinB | |||