Escherichia coli isolate 2016-17-292 |
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Putative Escherichia coli isolate 2016-17-292 RM systems
Ref: Haverkamp H.A:,T. unpublished
REBASE ref # 31332
Complete sequence: 4,841,444 bp
GenBank #: LR882493
REBASE acronym: Eco17292
Org_num: 45042
All begin QREC_QR292_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 324 | Cell division protein DamX | |||
| 325 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco17292DamP |
| 326 | Ribulose-phosphate 3-epimerase | |||
| 450 | 59 aa hypothetical protein | |||
| 451 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco17292ORF451P |
| 452 | DNA-binding protein Fis | |||
| 2630 | inner membrane transporter YedA | |||
| 2631 | V | V.SsoSE61DcmP (100% identity) | V.Eco17292DcmP | |
| 2632 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco17292DcmP |
| 2633 | protein YedJ | |||
| 3070 | 804 aa hypothetical protein | |||
| 3071 | M | M.Ecost64ORF15095P (100% identity) | GATC | M.Eco17292ORF3071P |
| 3072 | protein YbiI | |||
| 3119 | 56 aa hypothetical protein | |||
| 3120 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco17292ORF3120P |
| 3121 | 148 aa hypothetical protein | |||
| 3371 | 64 aa hypothetical protein | |||
| 3372 | M | M.EcosE1ORFAP (100% identity) | M.Eco17292ORF3372P | |
| 3373 | 64 aa hypothetical protein | |||
| 3651 | Crossover junction endodeoxyribonuclease RusA | |||
| 3652 | M | M.EcoECO21ORF17780P (100% identity) | GATC | M.Eco17292ORF3652P |
| 3653 | 162 aa hypothetical protein | |||
| 4036 | 428 aa hypothetical protein | |||
| 4037 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco17292ORF4038P |
| 4038 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco17292ORF4038P |
| 4039 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco17292ORF4038P |
| 4040 | IS21 family transposase ISEc12 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2860 | IS3 family transposase IS2 | |||
| 2861 | R | Ecochi7122GmrSDP (100% identity) | Eco17292GmrSDP | |
| 2862 | DNA-invertase hin | |||
| 4034 | Glycosyltransferase GlyG | |||
| 4035 | R | EcosS3McrBP (100% identity) | Eco17292McrBP | |
| 4036 | R | EcosS9McrCP (100% identity) | Eco17292McrCP | |
| 4037 | 579 aa hypothetical protein | |||