Escherichia coli O18ac:H14 873.10 |
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Putative Escherichia coli O18ac:H14 873.10 RM systems
Ref: Guragain,M. et al. unpublished
REBASE ref # 31331
| Sequence length: | GenBank #: | |
| Chromosome: | 4,797,000 bp | CP061754 |
| plasmid unnamed1: | 267,684 bp | CP061755 |
| plasmid unnamed2: | 115,966 bp | CP061756 |
| plasmid unnamed3: | 112,745 bp | CP061757 |
REBASE acronym: Eco87310
Org_num: 44926
All begin IEC99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5820 | type I restriction endonuclease subunit R | |||
| 5825 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco87310ORF5830P |
| 5830 | M | M.Kqu5BL06ORF28940P (100% identity) | GGANNNNNCTC | M.Eco87310ORF5830P |
| 5835 | tyrosine-type recombinase/integrase | |||
| plasmid unnamed2 | ||||
| 24880 | IS6-like element IS26 family transposase | |||
| 24885 | R | EcoWEM25ORF955P (54% identity) | Eco87310ORF24915P | |
| 24890 | IS30-like element IS30 family transposase | |||
| 24895 | 99 aa hypothetical protein | |||
| 24900 | DUF262 domain-containing protein | |||
| 24905 | DUF262 domain-containing protein | |||
| 24910 | S | S.Kpn1401ORF4490P (100% identity) | S.Eco87310ORF24915P | |
| 24915 | M | M.Kpn1401ORF4490P (100% identity) | M.Eco87310ORF24915P | |
| 24920 | transcription factor | |||
| 25260 | type II toxin-antitoxin system Phd/YefM family | |||
| 25265 | M | M.EcoXD35ORF2380P (100% identity) | M.Eco87310ORF25265P | |
| 25270 | S | S.Eco17C14ORF20570P (66% identity) | S.Eco87310ORF25265P | |
| 25275 | anticodon nuclease | |||
| 25280 | R | Eco17C14ORF20570P (99% identity) | Eco87310ORF25265P | |
| 25285 | IS66 family insertion sequence hypothetical | |||
| plasmid unnamed3 | ||||
| 25875 | DNA polymerase III subunit theta | |||
| 25880 | M | M.Efe28C21ORF24055P (99% identity) | M.Eco87310ORF25880P | |
| 25885 | S | S.Eal15116ORF24380P (96% identity) | S.Eco87310ORF25880P | |
| 25890 | R | EcoH238ORFAP (98% identity) | Eco87310ORF25880P | |
| 25895 | 158 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1870 | cell division protein DamX | |||
| 1875 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco87310DamP |
| 1880 | ribulose-phosphate 3-epimerase | |||
| 2495 | DUF2556 family protein | |||
| 2500 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.Eco87310ORF2500P |
| 2505 | tyrosine-type recombinase/integrase | |||
| 5985 | TraR/DksA family transcriptional regulator | |||
| 5990 | M | M.EclWP8ORF33560P (99% identity) | GATC | M.Eco87310ORF5990P |
| 5995 | replication endonuclease | |||
| 9660 | phosphohydrolase | |||
| 9665 | M | M.EcosEC29DcmP (100% identity) | CCWGG | M.Eco87310DcmP |
| 9670 | V | V.SflFF64DcmP (100% identity) | V.Eco87310DcmP | |
| 9675 | drug/metabolite exporter YedA | |||
| 21740 | AAA family ATPase | |||
| 21745 | M | M.SflN116ORF17750P (100% identity) | M.Eco87310ORF21745P | |
| 21750 | antitermination protein | |||
| 21770 | LexA family transcriptional regulator | |||
| 21775 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco87310ORF21775P |
| 21780 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 24025 | thermonuclease family protein | |||
| ??? | M | M.SenFC745ORF23370P (100% identity) | M.Eco87310ORF24030P | |
| 24035 | 56 aa hypothetical protein | |||
| 24325 | DNA-binding protein | |||
| 24330 | M | M.Ype21801ORF197P (100% identity) | M.Eco87310ORF24330P | |
| 24335 | 273 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25350 | tellurite resistance TerB family protein | |||
| 25365 | M | M.Eco98082ORF24930P (99% identity) | M.Eco87310ORF25365P | |
| 25370 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5890 | GTPase family protein | |||
| 5895 | M | M.EcoNH21ORF3075P (98% identity) | M.Eco87310ORF5895P | |
| 5900 | R | EcoNH21ORF3075P (99% identity) | Eco87310ORF5895P | |
| 5905 | inovirus Gp2 family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed3 | ||||
| 25930 | 76 aa hypothetical protein | |||
| 25935 | M | M.Sso524ORF460P (100% identity) | M.Eco87310ORF25935P | |
| 25940 | 269 aa hypothetical protein | |||