Prevotella copri YF2 |
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Putative Prevotella copri YF2 RM systems
Ref: Guo,F. and Li,H. unpublished
REBASE ref # 31302
| Sequence length: | GenBank #: | |
| Chromosome: | 3,748,729 bp | CP042464 |
| plasmid unnamed1: | 115,306 bp | CP042465 |
REBASE acronym: PcoYF2
Org_num: 44760
All begin FO447_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2075 | 81 aa hypothetical protein | |||
| 2080 | M | M.ScoH2497ORFBP (85% identity) | M.PcoYF2ORF2080P | |
| 2085 | 103 aa hypothetical protein | |||
| 5885 | IS1380-like element IS612 family transposase | |||
| 5890 | RM | Bco11035III (26% identity) | PcoYF2ORF5895BP | |
| 5895 | RM | Pgi2801ORF10175AP (35% identity) | PcoYF2ORF5895AP | |
| 5900 | ATP-binding protein | |||
| 6145 | helix-turn-helix transcriptional regulator | |||
| 6150 | M | M.PspW6195II (73% identity) | M.PcoYF2ORF6150P | |
| 6155 | R | PspW6195IIP (79% identity) | PcoYF2ORF6150P | |
| 6160 | 218 aa hypothetical protein | |||
| 6185 | 82 aa hypothetical protein | |||
| 6190 | R | Pme3C08ORF873P (74% identity) | PcoYF2ORF6190P | |
| 6195 | modification methylase | |||
| 6190 | DUF262 domain-containing protein | |||
| 6195 | M | M.PcoFMU4ORFIP (60% identity) | M.PcoYF2ORF6195P | |
| 6200 | N-acetylmuramic acid 6-phosphate etherase | |||
| 14975 | 164 aa hypothetical protein | |||
| 14980 | R | Rsp111151ORF9180P (39% identity) | PcoYF2ORF15000P | |
| 14985 | transposase | |||
| 14990 | tyrosine-type recombinase/integrase | |||
| 14995 | helix-turn-helix transcriptional regulator | |||
| 15000 | M | M2.ScoHDE06ORF3880P (94% identity) | M1.PcoYF2ORF15000P | |
| 15005 | M | M1.ScoHDE06ORF3880P (55% identity) | M2.PcoYF2ORF15000P | |
| 15010 | 144 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 15380 | 175 aa hypothetical protein | |||
| 15385 | M | M.PcoFMU4ORFLP (71% identity) | M.PcoYF2ORF15385P | |
| 15390 | sensor histidine kinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5925 | 89 aa hypothetical protein | |||
| 5930 | R | Psp1327ORF7745P (66% identity) | PcoYF2ORF5935P | |
| 5935 | M | M.Pac52212ORF2253P (67% identity) | M.PcoYF2ORF5935P | |
| 5940 | dephospho-CoA kinase | |||