Pelobacter carbinolicus DSM 2380 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pelobacter carbinolicus DSM 2380 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9130
Complete sequence: 3,665,893 bp
GenBank #: CP000142 (NC_007498)
REBASE acronym: Pca
Org_num: 4182
All begin Pcar_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 896 | calcium-translocating P-type ATPase | |||
| 897 | R | MspJAM1ORF2154P (66% identity) | PcaORF897P | |
| 898 | nucleotidyltransferase substrate-binding | |||
| 2922 | Tn7 transposon transposition protein TnsD | |||
| 2923 | R | AspDMS1ORF4470P (97% identity) | GCCNNNNNNTGCG | PcaIP |
| 2924 | S | S.Mme286ORFQP (76% identity) | GCCNNNNNNTGCG | S.PcaI |
| 2925 | M | M2.Dph13687ORF600P (88% identity) | GCCNNNNNNTGCG | M2.PcaI |
| 2926 | 77 aa hypothetical protein | |||
| 2927 | M | M1.GurSL11ORF4530P (92% identity) | GCCNNNNNNTGCG | M1.PcaI |
| 2928 | 547 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 120 | transposase of ISPca3, IS481 family | |||
| 121 | RM | UviJGIORFD3P (58% identity) | GACGAG | PcaII |
| 122 | 312 aa hypothetical protein | |||
| 417 | D-3-phosphoglycerate dehydrogenase | |||
| 418 | R | AspS89ORFBP (52% identity) | GAGCTC | PcaORF419P |
| 3198 | helix-turn-helix transcriptional regulator, | |||
| 419 | M | M.PciWXP4ORF10980P (56% identity) | GAGCTC | M.PcaORF419P |
| 420 | phage integrase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2728 | transposase of ISPca3, IS481 family | |||
| 2729 | R | Arh95ORF415P (60% identity) | PcaORF2729P | |
| 2730 | ATP-binding protein, putative | |||
| 2731 | M | adenine-specific DNA methylase | M.PcaORF2729P | |
| 2732 | ribonucleoside triphosphate reductase-activating | |||