Haemophilus influenzae TAMBA230 |
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Putative Haemophilus influenzae TAMBA230 RM systems
Ref: Kubota,M. and Kenzaka,T. unpublished
REBASE ref # 31272
Complete sequence: 1,809,645 bp
GenBank #: AP022846
REBASE acronym: Hin230
Org_num: 44699
All begin JPHIA_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7770 | 209 aa hypothetical protein | |||
| 7780 | R | Hin8730ORF8000P (99% identity) | GCANNNNNNNTAYG | Hin230ORF7810P |
| 7790 | REP-associated tyrosine transposase | |||
| 7800 | S | S.HinR548ORFDP (62% identity) | GCANNNNNNNTAYG | S.Hin230ORF7810P |
| 7810 | M | M.HinHia1IV (100% identity) | GCANNNNNNNTAYG | M.Hin230ORF7810P |
| 7820 | oligopeptidase A | |||
| 11860 | translation initiation factor IF-2 | |||
| 11870 | R | Hin8730ORF14820P (99% identity) | Hin230ORF11920P | |
| 11880 | 108 aa hypothetical protein | |||
| 11890 | 139 aa hypothetical protein | |||
| 11900 | FRG domain-containing protein | |||
| 11910 | S | S.Hin25588ORFFP (100% identity) | S.Hin230ORF11920P | |
| ??? | M | M.HinHia1ORF8610P (100% identity) | M.Hin230ORF11920P | |
| 11930 | ribosome-binding factor A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1370 | UPF0597 protein | |||
| 1380 | R | HinHia1IP (100% identity) | GANTC | Hin230ORF1390P |
| 1390 | M | M.Hin8730ORF1390P (100% identity) | GANTC | M.Hin230ORF1390P |
| 1400 | 253 aa hypothetical protein | |||
| 4840 | DNA-directed RNA polymerase subunit beta | |||
| 4850 | M | M.HinR548II (100% identity) | GTYRAC | M.Hin230ORF4850P |
| 4860 | R | HinHia1IIP (100% identity) | GTYRAC | Hin230ORF4850P |
| 4870 | tellurite resistance protein TehA | |||
| 7640 | 148 aa hypothetical protein | |||
| 7650 | M | M.HinHia1ORF3125P (100% identity) | M.Hin230ORF7650P | |
| 7660 | 115 aa hypothetical protein | |||
| 12830 | USG-1 protein homolog | |||
| 12840 | S | S.HinHia1ORF275P (97% identity) | S.Hin230ORF12850P | |
| ??? | RM | HinHia1ORF275P (100% identity) | Hin230ORF12850P | |
| 12870 | tryptophan synthase alpha chain | |||
| 13370 | UPF0267 protein | |||
| 13380 | R | HinHia1ORF520P (100% identity) | AAGCTT | Hin230ORF13390P |
| 13390 | M | M.HinHia1ORF520P (100% identity) | AAGCTT | M.Hin230ORF13390P |
| 13400 | valine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16180 | ribonuclease HII | |||
| ??? | M | M.HinHia1ORF7495P (97% identity) | M.Hin230ORF16190P | |
| 16210 | R | HinHia1ORF7495P (99% identity) | Hin230ORF16190P | |
| 16220 | 113 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7860 | phosphatidylglycerophosphatase B | |||
| 7870 | M | M.HinHia1III (100% identity) | GATC | M.Hin230ORF7870P |
| 7880 | 3-dehydroquinate synthase | |||