Rhodobacteraceae bacterium isolate PB-A2_LS01-2011-b |
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Putative Rhodobacteraceae bacterium isolate PB-A2_LS01-2011-b RM systems
Ref: Wilbanks,E.G. unpublished
REBASE ref # 31234
GenBank #: JAERIP000000000
REBASE acronym: RbaPBA2b
Org_num: 44529
All begin JKP98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13350 | 963 aa hypothetical protein | |||
| ??? | R | RspA2ORFD1P (96% identity) | RbaPBA2bORF13355P | |
| 13370 | 49 aa hypothetical protein | |||
| 13375 | 79 aa hypothetical protein | |||
| ??? | S | S.RspA2ORFD1P (80% identity) | S.RbaPBA2bORF13355P | |
| 18315 | 129 aa hypothetical protein | |||
| ??? | R | RspA2ORFDP (98% identity) | CATNNNNNNNTCTC | RbaPBA2bIIP |
| 18335 | S | S.RspA2ORFDP (36% identity) | CATNNNNNNNTCTC | S2.RbaPBA2bII |
| 18340 | S | S.RspA2ORFDP (42% identity) | CATNNNNNNNTCTC | S1.RbaPBA2bII |
| 18345 | DUF4917 family protein | |||
| ??? | M | M.MpoFDF1TORF4260P (55% identity) | CATNNNNNNNTCTC | M.RbaPBA2bII |
| 23780 | 579 aa hypothetical protein | |||
| 23785 | S | S.RspA2ORFHP (100% identity) | GACNNNNNTTTC | S.RbaPBA2bI |
| 23790 | DUF86 domain-containing protein | |||
| 23795 | 46 aa hypothetical protein | |||
| 23800 | IS21-like element helper ATPase IstB | |||
| 23805 | IS21 family transposase | |||
| 23810 | M | M.Rmu3ORF3928P (73% identity) | GACNNNNNTTTC | M.RbaPBA2bI |
| 23815 | R | RspA2ORFPP (95% identity) | GACNNNNNTTTC | RbaPBA2bIP |
| 23820 | type II toxin-antitoxin system VapC family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12805 | 95 aa hypothetical protein | |||
| 12810 | M | M.RbaPBA2bORF5150P (98% identity) | M.RbaPBA2bORF12810P | |
| 12815 | 73 aa hypothetical protein | |||
| 26835 | aspartate--tRNA ligase | |||
| 26840 | R | Mme286ORFGP (80% identity) | RbaPBA2bORF26845P | |
| 26845 | M | M.RspA2ORFCP (58% identity) | M.RbaPBA2bORF26845P | |
| 26850 | Hint domain-containing protein | |||
| 15940 | HNH endonuclease | |||
| 15945 | M | M.RspA2ORFGP (99% identity) | M.RbaPBA2bORF15945P | |
| 15950 | DNA cytosine methyltransferase | |||
| 15940 | HNH endonuclease | |||
| ??? | M | M.RspA2ORFFP (100% identity) | M.RbaPBA2bORF15950P | |
| 15955 | 72 aa hypothetical protein | |||
| 5145 | 148 aa hypothetical protein | |||
| 5150 | M | M.Mme286ORFY1P (93% identity) | M.RbaPBA2bORF5150P | |
| 5155 | 73 aa hypothetical protein | |||
| 13135 | ATP-binding domain-containing protein | |||
| 13140 | M | M.RspA2ORFBP (97% identity) | M.RbaPBA2bORF13140P | |
| 13145 | DNA mismatch endonuclease Vsr | |||
| 3945 | UvrD-helicase domain-containing protein | |||
| 3950 | M | M.RspA2ORFRP (81% identity) | M.RbaPBA2bORF3950P | |
| 3955 | V | V.RspA2ORFRP (77% identity) | V.RbaPBA2bORF3950P | |
| 3960 | HNH endonuclease | |||
| 13330 | 65 aa hypothetical protein | |||
| ??? | M | M1.RspA2ORFC1P (80% identity) | M.RbaPBA2bORF13340P | |
| 13345 | site-specific DNA-methyltransferase | |||
| 13340 | site-specific DNA-methyltransferase | |||
| 13345 | M | M2.RspA2ORFC1P (86% identity) | M.RbaPBA2bORF13345P | |
| 13350 | 963 aa hypothetical protein | |||
| 11435 | GNAT family N-acetyltransferase | |||
| 11440 | M | M.RspA2I (100% identity) | GANTC | M.RbaPBA2bIII |
| 11445 | ribonuclease HII | |||
| 740 | restriction endonuclease | |||
| ??? | M | M.Mme286ORFWP (39% identity) | M.RbaPBA2bORF745P | |
| 755 | ATP-binding cassette domain-containing protein | |||
| 20995 | aspartate--tRNA ligase | |||
| 21000 | M | M.RspA2ORFCP (72% identity) | M.RbaPBA2bORF21000P | |
| 21005 | Hint domain-containing protein | |||
| 9240 | transposase | |||
| 9245 | M | M1.RspA2ORFXP (93% identity) | M.RbaPBA2bORF9245P | |
| 9250 | site-specific DNA-methyltransferase | |||
| 9245 | DNA cytosine methyltransferase | |||
| 9250 | M | M.RbaPBA2aORF20845P (99% identity) | M.RbaPBA2bORF9250P | |
| 9255 | IS21-like element helper ATPase IstB | |||
| 23295 | 142 aa hypothetical protein | |||
| ??? | M | M.Mme286ORFNP (42% identity) | M.RbaPBA2bORF23305P | |
| 23310 | 72 aa hypothetical protein | |||
| 23295 | 142 aa hypothetical protein | |||
| 23300 | M | M.RspA2ORFQP (91% identity) | M.RbaPBA2bORF23300P | |
| 23305 | DNA cytosine methyltransferase | |||
| 9635 | DEAD/DEAH box helicase | |||
| ??? | RM | RspA2ORFMP (99% identity) | RbaPBA2bORF9640P | |
| 9660 | 262 aa hypothetical protein | |||
| 9800 | 50 aa hypothetical protein | |||
| ??? | M | M1.RspA2ORFJP (80% identity) | M.RbaPBA2bORF9805P | |
| 9810 | site-specific DNA-methyltransferase | |||
| 9805 | DNA cytosine methyltransferase | |||
| 9810 | M | M.Pph9175ORF19100P (92% identity) | M.RbaPBA2bORF9810P | |
| 9815 | 142 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22625 | MBL fold metallo-hydrolase | |||
| 22635 | M | M.RspA2ORFOP (100% identity) | M.RbaPBA2bORF22635P | |
| 22640 | IS21-like element helper ATPase IstB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18470 | EVE domain-containing protein | |||
| 18475 | R | RspA2McrBP (32% identity) | RbaPBA2bMcrBP | |
| 18480 | R | RspA2McrCP (45% identity) | RbaPBA2bMcrCP | |
| 18490 | IS200/IS605 family transposase | |||