Alphaproteobacteria bacterium isolate PB-A3_LS01-2011-a |
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Putative Alphaproteobacteria bacterium isolate PB-A3_LS01-2011-a RM systems
Ref: Wilbanks,E.G. unpublished
REBASE ref # 31234
GenBank #: JAERIN000000000
REBASE acronym: AbaPBA3
Org_num: 44530
All begin JKP92_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6910 | hypothetical protein | |||
| 6915 | RM | MspA3ORFEP (100% identity) | AbaPBA3ORF6915P | |
| 6920 | DUF262 domain-containing protein | |||
| 9115 | 88 aa hypothetical protein | |||
| 9120 | RM | MspA3II (98% identity) | CAYGAC | AbaPBA3II |
| 5265 | 65 aa hypothetical protein | |||
| 5270 | R | MspA3ORFDP (97% identity) | AbaPBA3ORF5270P | |
| 5275 | 102 aa hypothetical protein | |||
| 8435 | Fic family protein | |||
| 8440 | M | M1.MspA3ORFFP (96% identity) | M1.AbaPBA3ORF8440P | |
| 8445 | M | M2.MspA3ORFFP (100% identity) | M2.AbaPBA3ORF8440P | |
| 8450 | RM | MspA3ORFFP (96% identity) | AbaPBA3ORF8440P | |
| 8455 | 158 aa hypothetical protein | |||
| 2360 | flagellar hook-basal body complex protein | |||
| 2365 | M | M.MspA3ORFBP (100% identity) | M.AbaPBA3ORF2365P | |
| 2370 | HNH endonuclease | |||
| 5005 | flagellar assembly protein FliX | |||
| 5010 | M | M.MspA3I (100% identity) | GANTC | M.AbaPBA3I |
| 5015 | UDP-N-acetylglucosamine | |||
| 1765 | helix-turn-helix domain-containing protein | |||
| 1770 | M | M.MspA3ORFAP (100% identity) | TCTAGA | M.AbaPBA3ORF1770P |
| 1775 | acetyl-CoA carboxylase carboxyltransferase | |||
| 430 | UMP kinase | |||
| 435 | M | M.MspA3ORFMP (100% identity) | M.AbaPBA3ORF435P | |
| 440 | DotA/TraY family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8550 | tyrosine-type recombinase/integrase | |||
| 8555 | R | MspA3ORFGP (100% identity) | ACATC | AbaPBA3IVP |
| 8560 | M | M.MspA3ORFGP (100% identity) | ACATC | M.AbaPBA3IV |
| 8565 | recombinase family protein | |||
| 8590 | peptidoglycan-binding protein | |||
| 8595 | R | MspA3ORFHP (98% identity) | AbaPBA3ORF8600P | |
| 8600 | M | M.MspA3ORFHP (95% identity) | M.AbaPBA3ORF8600P | |
| 8605 | 91 aa hypothetical protein | |||
| 1460 | 88 aa hypothetical protein | |||
| 1465 | R | MspA3IIIP (98% identity) | AGGAG | AbaPBA3IIIP |
| 1470 | M | M.MspA3III (100% identity) | AGGAG | M.AbaPBA3III |
| 1475 | 185 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1430 | type III pantothenate kinase | |||
| 1435 | R | MspA3Mrr2P (100% identity) | AbaPBA3Mrr2P | |
| 1440 | acetolactate synthase 3 large subunit | |||
| 225 | AAA family ATPase | |||
| 230 | R | MspA3MrrP (100% identity) | AbaPBA3MrrP | |
| 235 | 30S ribosomal protein S6 | |||