Oceanicaulis species PB-A1_LS01-2011-a |
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Putative Oceanicaulis species PB-A1_LS01-2011-a RM systems
Ref: Wilbanks,E.G. unpublished
REBASE ref # 17943
GenBank #: JAERIL000000000
REBASE acronym: OspA1
Org_num: 13579
All begin JKP96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 590 | site-specific integrase | |||
| 595 | R | Mme286ORFR1P (100% identity) | ATGNNNNNNCTGG | OspA1IIP |
| 600 | restriction endonuclease | |||
| 605 | 131 aa hypothetical protein | |||
| 610 | 128 aa hypothetical protein | |||
| 615 | S | S.Mme286ORFR1P (100% identity) | ATGNNNNNNCTGG | S.OspA1II |
| ??? | M | M.Mme286ORFR1P (100% identity) | ATGNNNNNNCTGG | M.OspA1II |
| 625 | 176 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15595 | ribonuclease HII | |||
| ??? | M | M.OspA1I (96% identity) | GANTC | M.OspA1ORF15600P |
| 15605 | A/G-specific adenine glycosylase | |||
| 15595 | ribonuclease HII | |||
| ??? | M | M.OspA1ORF15600P (96% identity) | GANTC | M.OspA1I |
| 15605 | A/G-specific adenine glycosylase | |||
| 6570 | 128 aa hypothetical protein | |||
| 6575 | M | M.KvuY25ORF2025P (55% identity) | GATC | M.OspA1ORF6575P |
| 6580 | AAA family ATPase | |||
| 7290 | 75 aa hypothetical protein | |||
| 7295 | M | M.Mme286ORFZ1P (100% identity) | M.OspA1ORF7295P | |
| 7300 | 163 aa hypothetical protein | |||
| 4620 | helix-turn-helix domain-containing protein | |||
| ??? | R | Mme286ORFE2P (100% identity) | RGATCY | OspA1IIIP |
| ??? | M | M.Mme286ORFF2P (100% identity) | RGATCY | M.OspA1III |
| 4635 | DGQHR domain-containing protein | |||
| 5240 | ATP-binding protein | |||
| 5245 | V | V.NinC115ORF10163P (59% identity) | V.OspA1ORF5250P | |
| 5250 | M | M.NinC115ORF10163P (68% identity) | M.OspA1ORF5250P | |
| 5255 | type II toxin-antitoxin system Phd/YefM family | |||
| 4065 | 299 aa hypothetical protein | |||
| 4070 | M | M.HbaML37ORF10665P (69% identity) | M.OspA1ORF4070P | |
| 4075 | V | V.HbaML37ORF10665P (62% identity) | V.OspA1ORF4070P | |
| 4080 | LysR family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HbaIII (25% identity) | M.OspA1ORF14655P | |
| 14660 | 378 aa hypothetical protein | |||
| ??? | M | M.AflD11M2ORF11305P (28% identity) | M.OspA1ORF15540P | |
| 15545 | R | AflD11M2ORF11305P (62% identity) | OspA1ORF15540P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 595 | type I restriction endonuclease subunit R | |||
| 600 | R | Pab2014MrrP (64% identity) | OspA1MrrP | |
| 605 | 131 aa hypothetical protein | |||