Providencia rettgeri FZB001 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Providencia rettgeri FZB001 RM systems
Ref: Shi,Y. unpublished
REBASE ref # 31231
Complete sequence: 4,581,419 bp
GenBank #: CP060821
REBASE acronym: PreB001
Org_num: 44525
All begin H9L31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9345 | AAA family ATPase | |||
| ??? | S | S.Kox5ORF24860P (91% identity) | GAAGNNNNNNTCG | S.PreB001I |
| 9355 | M | M.KquA708ORF24885P (94% identity) | GAAGNNNNNNTCG | M.PreB001I |
| 9360 | R | Kae1464ORF21840P (97% identity) | GAAGNNNNNNTCG | PreB001IP |
| 9365 | restriction endonuclease | |||
| 9445 | nuclease | |||
| 9450 | S | S.DfaECM1ORF19885P (67% identity) | GAAYNNNNNNNNTTGG | S.PreB001II |
| 9455 | M | M.Pre2531ORF39020P (99% identity) | GAAYNNNNNNNNTTGG | M.PreB001II |
| 9460 | R | PspV046ORF18845P (100% identity) | GAAYNNNNNNNNTTGG | PreB001IIP |
| 9465 | transcriptional regulator LrhA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4195 | 115 aa hypothetical protein | |||
| 4200 | M | M.PreYPR31ORF9520P (98% identity) | M.PreB001ORF4200P | |
| 4205 | 81 aa hypothetical protein | |||
| 12700 | 222 aa hypothetical protein | |||
| 12705 | R | PspV109ORFDP (99% identity) | PreB001ORF12705P | |
| 12710 | ROK family protein | |||
| 21115 | 292 aa hypothetical protein | |||
| 21120 | M | M.Pre235ORF12085P (91% identity) | M.PreB001ORF21120P | |
| 21125 | TrmB family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9360 | DEAD/DEAH box helicase family protein | |||
| 9365 | R | Psp99MrrP (99% identity) | PreB001MrrP | |
| 9370 | DNA-binding protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6985 | SPOR domain-containing protein | |||
| 6990 | M | M.PspV109ORFGP (100% identity) | M.PreB001ORF6990P | |
| 6995 | ribulose-phosphate 3-epimerase | |||
| 16200 | TraR/DksA family transcriptional regulator | |||
| 16205 | M | M.Pre1451ORF1200P (96% identity) | M.PreB001ORF16205P | |
| 16210 | DUF5405 family protein | |||