Xanthomonas hortorum pv. vitians LM16734 |
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Putative Xanthomonas hortorum pv. vitians LM16734 RM systems
Ref: Moriniere,L. et al. unpublished
REBASE ref # 31214
Complete sequence: 5,213,310 bp
GenBank #: CP060399
REBASE acronym: Xho16734
Org_num: 44491
All begin XHV734_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3655 | 98 aa hypothetical protein | |||
| 3656 | R | XhoVT106ORF16110P (100% identity) | Xho16734ORF3660P | |
| 3657 | 195 aa hypothetical protein | |||
| 3658 | S | S.XhoVT106ORF16110P (100% identity) | S.Xho16734ORF3660P | |
| 3659 | Hydroxyacid dehydrogenase | |||
| 3660 | M | M.XhoVT106ORF16110P (100% identity) | M.Xho16734ORF3660P | |
| 3661 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 383 | 130 aa hypothetical protein | |||
| 384 | M | M.XhoVT106ORF1770P (100% identity) | M.Xho16734ORF384P | |
| 385 | R | XhoVT106ORF1770P (100% identity) | Xho16734ORF384P | |
| 387 | transposase | |||
| 749 | 80 aa hypothetical protein | |||
| 751 | M | M.XarCORFKP (86% identity) | M.Xho16734ORF751P | |
| 753 | V | V.XhoVT106ORF3340P (100% identity) | V.Xho16734ORF751P | |
| 754 | exported hypothetical protein | |||
| 1347 | DEAD/DEAH box helicase | |||
| ??? | M | M.XhoVT106ORF6340P (100% identity) | M.Xho16734ORF1348P | |
| 1350 | 118 aa hypothetical protein | |||
| 2418 | 103 aa hypothetical protein | |||
| 2419 | M | M.XciEB08ORF12205P (100% identity) | M.Xho16734ORF2419P | |
| 2420 | 92 aa hypothetical protein | |||
| 3747 | 204 aa hypothetical protein | |||
| 3749 | RM | Xari3ORF3292P (99% identity) | Xho16734ORF3749P | |
| 3750 | M | M.Xca1371ORF5405P (89% identity) | M.Xho16734ORF3749P | |
| 3751 | molybdopterin synthase, large subunit | |||
| 3781 | 211 aa hypothetical protein | |||
| 3782 | M | M.XhoVT106ORF16665P (100% identity) | M.Xho16734ORF3782P | |
| 3784 | Phage-related capsid packaging protein | |||
| 4461 | Large Ala/Gln-rich protein | |||
| 4462 | M | M.XbaIV (98% identity) | CRCCGGYG | M.Xho16734ORF4462P |
| 4463 | C.PsuNIP | |||
| 4464 | R | XbaIVP (46% identity) | CRCCGGYG | Xho16734ORF4462P |
| 4465 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3318 | 421 aa hypothetical protein | |||
| 3319 | R | Xca33086ORF15150P (100% identity) | Xho16734ORF3320P | |
| 3320 | M | M.Xho9ORF18975P (100% identity) | M.Xho16734ORF3320P | |
| 3321 | Peptidoglycan-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3660 | Type I restriction-modification system, | |||
| 3661 | R | XhoVT106MrrP (100% identity) | Xho16734Mrr2P | |
| 3662 | Plasmid stabilization system | |||
| 5021 | Peptidase S33 family protein | |||
| 5022 | R | Xho9MrrP (100% identity) | Xho16734MrrP | |
| 5023 | 441 aa hypothetical protein | |||