Escherichia coli ST18 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ST18 RM systems
Ref: Jackson,S.A. et al. unpublished
REBASE ref # 31208
Complete sequence: 4,825,686 bp
GenBank #: CP060709
REBASE acronym: EcoST18
Org_num: 44461
All begin H9445_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23240 | endoribonuclease SymE | |||
| 23245 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoST18ORF23250P |
| 23250 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoST18ORF23250P |
| 23255 | R | Esp17TGCORF18925P (100% identity) | AACNNNNNNGTGC | EcoST18ORF23250P |
| 23260 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11110 | drug/metabolite exporter YedA | |||
| 11115 | V | V.SflFF64DcmP (100% identity) | V.EcoST18DcmP | |
| 11120 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoST18DcmP |
| 11125 | phosphohydrolase | |||
| 17615 | DNA-binding transcriptional regulator Fis | |||
| 17620 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoST18ORF17620P |
| 17625 | DUF2556 family protein | |||
| 18240 | ribulose-phosphate 3-epimerase | |||
| 18245 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoST18DamP |
| 18250 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6955 | site-specific DNA recombinase | |||
| 6960 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoST18ORF6960P |
| 6965 | isocitrate dehydrogenase | |||
| 23225 | 906 aa hypothetical protein | |||
| 23230 | R | SenHNK130McrCP (100% identity) | EcoST18McrCP | |
| 23235 | R | SenHNK130McrBP (100% identity) | EcoST18McrBP | |
| 23240 | endoribonuclease SymE | |||
| 23255 | type I restriction-modification system | |||
| 23260 | R | SenHNK130MrrP (100% identity) | EcoST18MrrP | |
| 23265 | GTPase | |||