Escherichia coli MFDpir |
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Putative Escherichia coli MFDpir RM systems
Ref: Jackson,S.A. et al. unpublished
REBASE ref # 31208
Complete sequence: 4,686,434 bp
GenBank #: CP060708
REBASE acronym: EcoMFDpir
Org_num: 44460
All begin H9446_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22355 | endoribonuclease SymE | |||
| 22360 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoMFDpirORF22365P |
| 22365 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoMFDpirORF22365P |
| 22370 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoMFDpirORF22365P |
| 22375 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9975 | drug/metabolite exporter YedA | |||
| 9980 | V | V.SflFF64DcmP (100% identity) | V.EcoMFDpirDcmP | |
| 9985 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoMFDpirDcmP |
| 9990 | phosphohydrolase | |||
| 16495 | DNA-binding transcriptional regulator Fis | |||
| 16500 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoMFDpirORF16500P |
| 16505 | DUF2556 family protein | |||
| 17120 | ribulose-phosphate 3-epimerase | |||
| 17125 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMFDpirDamP |
| 17130 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5865 | site-specific DNA recombinase | |||
| 5870 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoMFDpirORF5870P |
| 5875 | isocitrate dehydrogenase | |||
| 22340 | 906 aa hypothetical protein | |||
| 22345 | R | SenHNK130McrCP (100% identity) | EcoMFDpirMcrCP | |
| 22350 | R | SenHNK130McrBP (100% identity) | EcoMFDpirMcrBP | |
| 22355 | endoribonuclease SymE | |||
| 22370 | type I restriction-modification system | |||
| 22375 | R | SenHNK130MrrP (100% identity) | EcoMFDpirMrrP | |
| 22380 | GTPase | |||