|
Putative Xylella fastidiosa subsp. multiplex IVIA5901 RM systems
Ref: Giampetruzzi,A. et al. Phytopathology 109 (2), 219-221 (2019)
REBASE ref # 31194
Complete sequence: 2,559,157 bp
GenBank #: CP047134
REBASE acronym: Xfa5901
Org_num: 44415
All begin DVT08_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1205 | DUF45 domain-containing protein | |||
??? | R | XfaESVLORF1195P (100% identity) | Xfa5901ORF1225P | |
??? | S | S.XfaRiv5ORF1215P (100% identity) | S.Xfa5901ORF1225P | |
??? | M | M.XfaESVLORF1195P (100% identity) | M.Xfa5901ORF1225P | |
1240 | 68 aa hypothetical protein | |||
11315 | 110 aa hypothetical protein | |||
11320 | R | XfaRiv5ORF10665P (100% identity) | Xfa5901ORF11330P | |
11325 | S | S.XfaSyVAORF2553P (100% identity) | S.Xfa5901ORF11330P | |
11330 | M | M.XfaFORF11195P (100% identity) | M.Xfa5901ORF11330P | |
11335 | DUF1524 domain-containing protein | |||
11335 | DUF1524 domain-containing protein | |||
11340 | R | XfaRiv5ORF10690P (100% identity) | Xfa5901ORF11355P | |
11345 | S | S.XfaY3CORF10835P (100% identity) | S.Xfa5901ORF11355P | |
11350 | 88 aa hypothetical protein | |||
11355 | M | M.XfaY3CORF10835P (100% identity) | M.Xfa5901ORF11355P | |
11360 | LysE family transporter | |||
11405 | 62 aa hypothetical protein | |||
11410 | R | XfaSyVAORF2573P (100% identity) | Xfa5901ORF11425P | |
11415 | 191 aa hypothetical protein | |||
11420 | S | S.XfaESVLORF11320P (95% identity) | S.Xfa5901ORF11425P | |
11425 | M | M.XfaSyVAORF2573P (100% identity) | M.Xfa5901ORF11425P | |
11430 | 136 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2005 | glycoside hydrolase family protein | |||
2010 | M | M.XfaRH1ORF2260P (100% identity) | M.Xfa5901ORF2010P | |
2015 | toxin-antitoxin system HicB family antitoxin | |||
4440 | DNA replication protein DnaD | |||
??? | M | M.XfaY3CORF5465P (100% identity) | M.Xfa5901ORF4445P | |
4450 | Ax21 family protein | |||
5740 | ATP-dependent helicase | |||
5745 | M | M.XfaRH1ORF8060P (100% identity) | M.Xfa5901ORF5745P | |
5750 | glycoside hydrolase family protein | |||
7635 | 132 aa hypothetical protein | |||
7640 | M | M.XfaSyVAORF2398P (86% identity) | M.Xfa5901ORF7640P | |
7645 | IS200/IS605 family element transposase accessory | |||
8175 | 65 aa hypothetical protein | |||
8185 | M | M.XfaY3CORF8005P (100% identity) | M.Xfa5901ORF8185P | |
8190 | R | XfaY3CORF8005P (100% identity) | Xfa5901ORF8185P | |
8195 | 52 aa hypothetical protein | |||
8615 | 148 aa hypothetical protein | |||
??? | M | M.XfaY3CORF8440P (100% identity) | M.Xfa5901ORF8620P | |
8630 | R | XfaY3CORF8440P (100% identity) | Xfa5901ORF8620P | |
8635 | 80 aa hypothetical protein | |||
8835 | DNA primase | |||
8840 | R | XfaRiv5ORF8515P (100% identity) | Xfa5901ORF8845P | |
8845 | M | M.XfaY3CORF8660P (100% identity) | M.Xfa5901ORF8845P | |
8850 | tryptophan--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3590 | 3-oxoacyl-ACP synthase III | |||
3595 | M | M.XfaRiv5ORF4780P (100% identity) | M.Xfa5901ORF3595P | |
3600 | 72 aa hypothetical protein | |||
3605 | R | Xfav25ORF6835P (100% identity) | Xfa5901ORF3595P | |
3610 | alpha/beta fold hydrolase |